RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Il36bQ9D6Z6 183 aa11.75□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Ndrg2Q9QYG0 371 aaKnown RBP11.75□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm13420A0A140LJJ2 248 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr601A2RS33 314 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm13271B1AYH9 182 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Tmem182B2RVY9 229 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Btbd2E9PUS2 523 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Srp54bE9PXC0 504 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr419E9Q0Y7 313 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm20715E9Q3L7 95 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm20683H3BKJ1 410 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 LplP11152 474 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Ggta1P23336 394 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Adam20Q7M763 760 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr1087Q7TR63 313 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr309Q7TS01 308 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Enkd1Q7TSV9 346 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Wdr48Q8BH57 676 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Tmem150cQ8C8S3 249 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 GmdsQ8K0C9 372 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Mic13Q8R404 119 aaKnown RBP11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr165Q8VFA2 313 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Smarcd2Q99JR8 531 aaKnown RBP11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Med18Q9CZ82 208 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Cmtm2aQ9DAR1 169 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Zfp869Q9DC47 529 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Dbf4Q9QZ41 663 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 AI182371A2AS37 356 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 GlsD3Z7P3 674 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Fbxw24E9PXM9 466 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 2410141K09RikK7N769 464 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Vmn2r28L7N203 852 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 KitlgP20826 273 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 RabggtbP53612 339 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Fgf9P54130 208 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Dvl2Q60838 736 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Adam9Q61072 845 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Pgr15lQ80T54 456 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Cggbp1Q8BHG9 167 aaKnown RBP11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 LipkQ8BM14 398 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 PurgQ8R4E6 350 aaKnown RBP11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr935Q8VG16 308 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Tex29Q9DA77 186 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Tmem27Q9ESG4 222 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 AicdaQ9WVE0 198 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Mbd4Q9Z2D7 554 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Dock3Q8CIQ7 2027 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm17728E9Q5K2 132 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Vmn2r82G3UWA2 865 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Irs3O54718 495 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 1700057G04RikQ3V0U0 232 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Muc19Q6JHY2 733 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Znf770Q8BIQ8 705 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Cuedc1Q8R3V6 388 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Clec2fQ8VI21 196 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Lcn8Q924P3 175 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Nop16Q9CPT5 178 aaKnown RBP11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Vmn1r56Q9EPS9 310 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr27Q9EQ90 311 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 TapbpQ9R233 465 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm26992S4R1A3 76 aa11.74□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Usp34Q6ZQ93 3582 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Ube2ql1A0PJN4 161 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 CtssO70370 340 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 RradO88667 308 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Lancl1O89112 399 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Hoxb5P09079 269 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 H2-T3P14432 384 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 RhoP15409 348 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Arf3P61205 181 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Lyg2Q3V1I0 213 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Cpeb3Q7TN99 716 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr198Q7TS40 306 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Vmn1r210Q8R274 306 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr1395Q8VGD7 317 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 PnpoQ91XF0 261 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Coq5Q9CXI0 327 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Klhl15A2AAX3 604 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Rnaset2aC0HKG5 259 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Rnaset2bC0HKG6 259 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm6803J3QPI8 144 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Grem1O70326 184 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 MplQ08351 625 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 4922502D21RikQ8C634 189 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 SbsnQ8CIT9 700 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Irf2bp1Q8R3Y8 584 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr1099Q8VG37 312 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Olfr870Q8VGG4 311 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Sfxn1Q99JR1 322 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Tnk1Q99ML2 666 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Rpl22l1Q9D7S7 122 aaKnown RBP11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Cml5Q9QXS8 227 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 RfxankQ9Z205 269 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm11756A2BEJ1 356 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Zfp97E9PZP6 546 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Zfp960L7N267 546 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Vmn2r89O35199 507 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Tra2bP62996 288 aaKnown RBP11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Masp1P98064 704 aa11.73□□□□□ -0.53
Clcn3-201ENSMUST00000004430 Gm648Q3UJ22 213 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms