RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ROR2Q01974 943 aaKnown RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 FMODQ06828 376 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 P2RY6Q15077 328 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 CEACAM16Q2WEN9 425 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 AADACL4Q5VUY2 407 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 NXNL2Q5VZ03 156 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 PLBD1Q6P4A8 553 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF474Q6S9Z5 364 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 LINGO2Q7L985 606 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 THAP5Q7Z6K1 395 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 C8orf59Q8N0T1 100 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 GABRG1Q8N1C3 465 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF808Q8N4W9 903 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 RELL2Q8NC24 303 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 BOD1Q96IK1 185 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 Q96MT0 163 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 RBM24Q9BX46 236 aaKnown RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 RACGAP1Q9H0H5 632 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 CRLF2Q9HC73 371 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 ELOVL5Q9NYP7 299 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 GPR52Q9Y2T5 361 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 FAM183AA6NL82 134 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF99A8MXY4 864 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-213ENST00000642137 DCTN6O00399 190 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 PRODHO43272 600 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 CTLA4P16410 223 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 SPI1P17947 270 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 IGHV1-2P23083 117 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 MYF6P23409 242 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 LAP3P28838 519 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 GUCA1AP43080 201 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-213ENST00000642137 BLVRAP53004 296 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 SH3BGRP55822 239 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-213ENST00000642137 IL5RAQ01344 420 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 TEKQ02763 1124 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 TGFBR3Q03167 851 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 TMED1Q13445 227 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 ETFDHQ16134 617 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 MEPCEQ7L2J0 689 aaKnown RBP10.84□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF627Q7L945 461 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 LUZP2Q86TE4 346 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 GID4Q8IVV7 300 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 FBLIM1Q8WUP2 373 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-213ENST00000642137 TEAD3Q99594 435 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 HCAR1Q9BXC0 346 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 HDHD5Q9BXW7 423 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 ANKRD60Q9BZ19 345 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 OR51V1Q9H2C8 321 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 Q9H521 79 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 MED20Q9H944 212 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 RASSF1Q9NS23 344 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 CLN6Q9NWW5 311 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 TAS2R16Q9NYV7 291 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 COA3Q9Y2R0 106 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-213ENST00000642137 LRRC42Q9Y546 428 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 ZFYVE26Q68DK2 2539 aa10.84□□□□□ -0.67
LINC00339-213ENST00000642137 RP1L1Q8IWN7 2480 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 SH3D21A4FU49 640 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 WIPF3A6NGB9 483 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 SNTNA6NMZ2 147 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 M0R129 80 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 EEF1E1O43324 174 aaKnown RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 GLCEO94923 617 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 ITGA5P08648 1049 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 GNAO1P09471 354 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 CLUP10909 449 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 PLA2G2AP14555 144 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 HOXB1P14653 301 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 NPR2P20594 1047 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 COX5AP20674 150 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 SLC2A5P22732 501 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 ASCL1P50553 236 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 FOXG1P55316 489 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 MRPS34P82930 218 aaKnown RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 GLO1Q04760 184 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 CDK5R2Q13319 367 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 MAD2L1BPQ15013 274 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 KCNMB1Q16558 191 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 FBXL19-AS1Q494R0 122 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 NRN1LQ496H8 165 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 KLHL12Q53G59 568 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 SFRP5Q5T4F7 317 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 GLB1L2Q8IW92 636 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 ZNF433Q8N7K0 673 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 OR9Q1Q8NGQ5 310 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 CA5BP1Q8WTZ4 195 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 ZNRF4Q8WWF5 429 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 ITLN2Q8WWU7 325 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-213ENST00000642137 NSMAFQ92636 917 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 RFKQ969G6 155 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 OTULINQ96BN8 352 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 LRRC46Q96FV0 321 aa10.83□□□□□ -0.68
LINC00339-213ENST00000642137 ZNF582Q96NG8 517 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms