RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	HIST1H2AC	Q93077	130 aa		12.52	□□□□□ -0.41
PHGDH-233	ENST00000642021	PNPLA2	Q96AD5	504 aa		12.52	□□□□□ -0.41
PHGDH-233	ENST00000642021	MMAB	Q96EY8	250 aa	Predicted RBP	12.52	□□□□□ -0.41
PHGDH-233	ENST00000642021	KLHL15	Q96M94	604 aa		12.52	□□□□□ -0.41
PHGDH-233	ENST00000642021	MAP3K3	Q99759	626 aa		12.52	□□□□□ -0.41
PHGDH-233	ENST00000642021	MRPS33	Q9Y291	106 aa	Known RBP	12.52	□□□□□ -0.41
PHGDH-233	ENST00000642021	TDRD6	O60522	2096 aa	Known RBP	12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	TRAV18	A0A075B6X5	111 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	MFSD2B	A6NFX1	497 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	OR6C65	A6NJZ3	312 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	OR5K4	A6NMS3	321 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	HOXD4	P09016	255 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	ZNF35	P13682	527 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	TACR3	P29371	465 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	POU3F4	P49335	361 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	RBMS2	Q15434	407 aa	Known RBP	12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	CLVS2	Q5SYC1	327 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	EEF1A1P5	Q5VTE0	462 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	ARMC6	Q6NXE6	501 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	LRRN1	Q6UXK5	716 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	ZNF417	Q8TAU3	575 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	TMEM106C	Q9BVX2	250 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	NXF5	Q9H1B4	397 aa	Known RBP	12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	UBQLN4	Q9NRR5	601 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	SLC22A13	Q9Y226	551 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	TMEM272	A0A1B0GTI8	110 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	PNP	P00491	289 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	S100A11	P31949	105 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	TOMM34	Q15785	309 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	C2orf76	Q3KRA6	126 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	TMUB2	Q71RG4	321 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	ZNF227	Q86WZ6	799 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	PRR22	Q8IZ63	422 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	OR8S1	Q8NH09	359 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	C4orf45	Q96LM5	186 aa		12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-233	ENST00000642021		B4DGG1	531 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	CD3D	P04234	171 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	IGHV4-34	P06331	123 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	LPL	P06858	475 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	MAOB	P27338	520 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	CCKBR	P32239	447 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	DLX5	P56178	289 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	OR2AK2	Q8NG84	335 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	SLC22A8	Q8TCC7	542 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	DCBLD2	Q96PD2	775 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	INTS14	Q96SY0	518 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	COMMD4	Q9H0A8	199 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	PRUNE2	Q8WUY3	3088 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	FXYD6-FXYD2	A0A087WZ82	144 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	TCRBV21S2A2	A0A5A6	115 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	TMEM212	A6NML5	194 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	C17orf105	B2RV13	164 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	C11orf98	E9PRG8	122 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	LGALS8	O00214	317 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	GOSR2	O14653	212 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ZNF264	O43296	627 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	UTS2	O95399	124 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	GTF2F2	P13984	249 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	MAZ	P56270	477 aa	Known RBP	12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	TAGLN	Q01995	201 aa	Known RBP	12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	FZD2	Q14332	565 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	MEP1B	Q16820	701 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ALKBH2	Q6NS38	261 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	TMEM184A	Q6ZMB5	413 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ZNF440	Q8IYI8	595 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ZNF563	Q8TA94	476 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	STK35	Q8TDR2	534 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	C15orf40	Q8WUR7	153 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ADO	Q96SZ5	270 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	GAL3ST1	Q99999	423 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ARL6	Q9H0F7	186 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	FXYD6	Q9H0Q3	95 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	ELOVL3	Q9HB03	270 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	GMEB2	Q9UKD1	530 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	SLC6A5	Q9Y345	797 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	HS3ST3A1	Q9Y663	406 aa		12.5	□□□□□ -0.41
PHGDH-233	ENST00000642021	TUBAL3	A6NHL2	446 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	PLG	P00747	810 aa	Predicted RBP	12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	ICAM2	P13598	275 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	GABRG2	P18507	467 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	CSF2RB	P32927	897 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	EGR3	Q06889	387 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	ETFDH	Q16134	617 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	SHE	Q5VZ18	495 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	PLPP7	Q8NBV4	271 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	OR6N1	Q8NGY5	312 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	SCD	O00767	359 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	NSA2	O95478	260 aa	Known RBP	12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	SEMA4F	O95754	770 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	IGF2	P01344	180 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	GABRA1	P14867	456 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	C4BPB	P20851	252 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	RABIF	P47224	123 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	SLC37A1	P57057	533 aa		12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	DLX2	Q07687	328 aa	Predicted RBP	12.49	□□□□□ -0.41
PHGDH-233	ENST00000642021	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms