RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	POU3F2	P20265	443 aa	Predicted RBP	15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	CD38	P28907	300 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	SNTA1	Q13424	505 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	CLPP	Q16740	277 aa	Predicted RBP	15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	TSTD1	Q8NFU3	115 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	OR4C16	Q8NGL9	310 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	OTOS	Q8NHW6	89 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	PMEPA1	Q969W9	287 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	MRPL48	Q96GC5	212 aa	Known RBP	15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	C7orf50	Q9BRJ6	194 aa	Known RBP	15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	SLITRK2	Q9H156	845 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	NPDC1	Q9NQX5	325 aa	Predicted RBP	15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	RNF215	Q9Y6U7	377 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	TRAV18	A0A075B6X5	111 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	IGKV3D-11	A0A0A0MRZ8	115 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	TRBV5-7	A0A0A0MS05	114 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	LOC101059948	A0A1B0GTJ6	334 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	RPS10-NUDT3	A0A1W2PQS6	291 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	ZNF254	O75437	659 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	CXCL2	P19875	107 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	POU3F4	P49335	361 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	CSNK1E	P49674	416 aa	Known RBP	15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	FMOD	Q06828	376 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	ESCO2	Q56NI9	601 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	FAM69A	Q5T7M9	428 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	OR10K2	Q6IF99	312 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	OR5M1	Q8NGP8	315 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	PHYHIP	Q92561	330 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	ZNF578	Q96N58	590 aa	Predicted RBP	15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	TBL1XR1	Q9BZK7	514 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	B3GNT2	Q9NY97	397 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	CTSF	Q9UBX1	484 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	MKL2	Q9ULH7	1088 aa		15.17	■□□□□ 0.02
PHGDH-223	ENST00000641597	FRG2C	A6NGY1	282 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	SHISA8	B8ZZ34	492 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	APEH	P13798	732 aa	Known RBP	15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	ABCD3	P28288	659 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	LCN1	P31025	176 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	PLCXD2	Q0VAA5	305 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	SMAD2	Q15796	467 aa	Known RBP	15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	SFRP5	Q5T4F7	317 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	GLDN	Q6ZMI3	551 aa	Predicted RBP	15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	OR51A2	Q8NGJ7	313 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	GPR148	Q8TDV2	347 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	DUSP19	Q8WTR2	217 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	OMA1	Q96E52	524 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CCDC120	Q96HB5	630 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CHST6	Q9GZX3	395 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CGGBP1	Q9UFW8	167 aa	Predicted RBP	15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CA14	Q9ULX7	337 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	NPTN	Q9Y639	398 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	NUP210L	Q5VU65	1888 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597		A0A1B0GVI7	797 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	ZSCAN5B	A6NJL1	495 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	SUSD5	O60279	629 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CTAG2	O75638	210 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CRYZL1	O95825	349 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	RLN1	P04808	185 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CALCB	P10092	127 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	RAG2	P55895	527 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	BIK	Q13323	160 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	RAB30	Q15771	203 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	CHMP1B	Q7LBR1	199 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	MCHR2	Q969V1	340 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	ACTR6	Q9GZN1	396 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597	COMMD4	Q9H0A8	199 aa		15.16	■□□□□ 0.02
PHGDH-223	ENST00000641597		A0A1W2PR77	199 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ACOT7	O00154	380 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	XKRY	O14609	159 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	TGM6	O95932	706 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	C2orf76	Q3KRA6	126 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ADGRG3	Q86Y34	549 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	LINC00346	Q8IVM7	164 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	MEIOB	Q8N635	442 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ZNF417	Q8TAU3	575 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	DCBLD2	Q96PD2	775 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ZNF587	Q96SQ5	575 aa	Predicted RBP	15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	LAT2	Q9GZY6	243 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	NARFL	Q9H6Q4	476 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	EXOSC3	Q9NQT5	275 aa	Known RBP	15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	HRH3	Q9Y5N1	445 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597		A0A1B0GUH1	482 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	PRSS37	A4D1T9	235 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	FITM1	A5D6W6	292 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	RHPN2P1	A8MT19	583 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ECD	O95905	644 aa	Predicted RBP	15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	RAB40AL	P0C0E4	278 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ADAM8	P78325	824 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ARHGAP40	Q5TG30	622 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	B3GNTL1	Q67FW5	361 aa	Predicted RBP	15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	GPR139	Q6DWJ6	353 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	NDUFAF7	Q7L592	441 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	KCTD20	Q7Z5Y7	419 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	GKN2	Q86XP6	184 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	OR51S1	Q8NGJ8	323 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	RAB40A	Q8WXH6	277 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	ELMOD3	Q96FG2	381 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	WWTR1	Q9GZV5	400 aa		15.15	■□□□□ 0.02
PHGDH-223	ENST00000641597	LMAN1L	Q9HAT1	526 aa		15.15	■□□□□ 0.02

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