RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SLC35F2Q8IXU6 374 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 FAM109AQ8N4B1 249 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 OR52N1Q8NH53 320 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 SMAP2Q8WU79 429 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-221ENST00000641573 GATAD2BQ8WXI9 593 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 OPALINQ96PE5 141 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 DOK1Q99704 481 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 EMC6Q9BV81 110 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 TSPAN10Q9H1Z9 355 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-221ENST00000641573 RERGLQ9H628 205 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 KLHL13Q9P2N7 655 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 CAB39Q9Y376 341 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-221ENST00000641573 PCDHGB7Q9Y5F8 929 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 NCKAP5O14513 1909 aa11.68□□□□□ -0.54
PHGDH-221ENST00000641573 TVP23AA6NH52 213 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 H3BMQ9 156 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 AHCYL1O43865 530 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 CXCL13O43927 109 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 SLC16A7O60669 478 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 VAMP5O95183 116 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 OR2T7P0C7T2 308 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 CTLA4P16410 223 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ENPP1P22413 925 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 NR4A1P22736 598 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 CRABP1P29762 137 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 EIF1AXP47813 144 aaKnown RBP11.67□□□□□ -0.54
PHGDH-221ENST00000641573 CENPAP49450 140 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 RGS6P49758 472 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 LHX2P50458 406 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 HCCSP53701 268 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 CLDN15P56746 228 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF85Q03923 595 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 MLLT11Q13015 90 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-221ENST00000641573 GALEQ14376 348 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF322Q6U7Q0 402 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-221ENST00000641573 LYPD4Q6UWN0 246 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 TMPRSS11AQ6ZMR5 421 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 TRILQ7L0X0 811 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 SLC16A9Q7RTY1 509 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 HDDC2Q7Z4H3 204 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ZBTB46Q86UZ6 589 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ZADH2Q8N4Q0 377 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF485Q8NCK3 441 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 OR2T27Q8NH04 317 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 OR10D3Q8NH80 312 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 CPT1CQ8TCG5 803 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 RAB2BQ8WUD1 216 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 SPRYD4Q8WW59 207 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-221ENST00000641573 KCNK17Q96T54 332 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 MFRPQ9BY79 579 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 DEFB127Q9H1M4 99 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ACKR4Q9NPB9 350 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 ISYNA1Q9NPH2 558 aa11.67□□□□□ -0.54
PHGDH-221ENST00000641573 IGLV1-36A0A0B4J1U3 117 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 A0A1W2PQL4 384 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-221ENST00000641573 SLC35F4A4IF30 521 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF726A6NNF4 738 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 CCRL2O00421 344 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 SMAD9O15198 467 aaKnown RBP11.66□□□□□ -0.54
PHGDH-221ENST00000641573 GABARAPO95166 117 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 COL8A1P27658 744 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 BLVRAP53004 296 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 CLDN17P56750 224 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 CLDN18P56856 261 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 PMP22Q01453 160 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 POU4F3Q15319 338 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 SSX1Q16384 188 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 RNFT1Q5M7Z0 435 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 DNM1P34Q6PK57 102 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 CREB3L2Q70SY1 520 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 ERI1Q8IV48 349 aaKnown RBP11.66□□□□□ -0.54
PHGDH-221ENST00000641573 TIGD4Q8IY51 512 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 OR9K2Q8NGE7 335 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 OR6X1Q8NH79 312 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 TM9SF4Q92544 642 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 ABTB1Q969K4 478 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-221ENST00000641573 RBP7Q96R05 134 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 TIMP4Q99727 224 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 BCL7BQ9BQE9 202 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 YIPF3Q9GZM5 350 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 ISG20L2Q9H9L3 353 aaKnown RBP11.66□□□□□ -0.54
PHGDH-221ENST00000641573 TIGARQ9NQ88 270 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 LIPGQ9Y5X9 500 aa11.66□□□□□ -0.54
PHGDH-221ENST00000641573 PRRC2CQ9Y520 2896 aaKnown RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 POLQO75417 2590 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 NPIPA2E9PIF3 369 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF670-ZNF695F2Z2N8 137 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 KHDRBS3O75525 346 aaKnown RBP11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ATE1O95260 518 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 GPANK1O95872 356 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ACTL6AO96019 429 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 IGHG1P01857 330 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 RNF224P0DH78 156 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 ZNF708P17019 499 aa11.65□□□□□ -0.54
PHGDH-221ENST00000641573 GADD45AP24522 165 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms