RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 FAM162AQ96A26 154 aa21.73■■□□□ 1.07
VEGFA-230ENST00000640482 HSH2DQ96JZ2 352 aa21.73■■□□□ 1.07
VEGFA-230ENST00000640482 FOXN4Q96NZ1 517 aa21.73■■□□□ 1.07
VEGFA-230ENST00000640482 MRPL37Q9BZE1 423 aaKnown RBP21.73■■□□□ 1.07
VEGFA-230ENST00000640482 NSRP1Q9H0G5 558 aaKnown RBP21.73■■□□□ 1.07
VEGFA-230ENST00000640482 KCNN2Q9H2S1 579 aa21.73■■□□□ 1.07
VEGFA-230ENST00000640482 SMURF2Q9HAU4 748 aa21.73■■□□□ 1.07
VEGFA-230ENST00000640482 SLC22A23A1A5C7 686 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 GMNCA6NCL1 334 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 SYNGR3O43761 229 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 ADRA2AP08913 450 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 DAOP14920 347 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 CD47Q08722 323 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 TOP3AQ13472 1001 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-230ENST00000640482 FXNQ16595 210 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 ANKDD1AQ495B1 522 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 CYP4Z1Q86W10 505 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 HIPK1Q86Z02 1210 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 NRMQ8IXM6 262 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 RNF113BQ8IZP6 322 aaKnown RBP21.72■■□□□ 1.07
VEGFA-230ENST00000640482 ZCCHC24Q8N2G6 241 aaKnown RBP21.72■■□□□ 1.07
VEGFA-230ENST00000640482 FAM107BQ9H098 131 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 MYLK2Q9H1R3 596 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 MAN2C1Q9NTJ4 1040 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 ABCD2Q9UBJ2 740 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 ADAM21Q9UKJ8 722 aa21.72■■□□□ 1.07
VEGFA-230ENST00000640482 KIAA1324LA8MWY0 1029 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-230ENST00000640482 M0R233 179 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 IGHV4-31P0DP07 118 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 MAKP20794 623 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 PRDX6P30041 224 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 GZMKP49863 264 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 SEC24CP53992 1094 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 PSME3P61289 254 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 PLP2Q04941 152 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 PRKCDQ05655 676 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 IQCCQ4KMZ1 466 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 ZNF730Q6ZMV8 503 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 RBM15BQ8NDT2 890 aaKnown RBP21.71■■□□□ 1.07
VEGFA-230ENST00000640482 OR1J2Q8NGS2 313 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 ACOT11Q8WXI4 607 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-230ENST00000640482 HDAC2Q92769 488 aaKnown RBP21.71■■□□□ 1.07
VEGFA-230ENST00000640482 ALG12Q9BV10 488 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 CDH20Q9HBT6 801 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 REV1Q9UBZ9 1251 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 RPS6KA6Q9UK32 745 aa21.71■■□□□ 1.07
VEGFA-230ENST00000640482 ABCA2Q9BZC7 2435 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 ANK3Q12955 4377 aaKnown RBP21.7■■□□□ 1.06
VEGFA-230ENST00000640482 IQCMA0A1B0GVH7 501 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 EFCAB9A8MZ26 197 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 FFAR1O14842 300 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 SLC2A10O95528 541 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 STAMBPO95630 424 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 IGHMP01871 453 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 SLC9A3P48764 834 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 CTXN1P60606 82 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 RPL27P61353 136 aaKnown RBP21.7■■□□□ 1.06
VEGFA-230ENST00000640482 MRPS34P82930 218 aaKnown RBP21.7■■□□□ 1.06
VEGFA-230ENST00000640482 MSMPQ1L6U9 139 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 TBC1D28Q2M2D7 210 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 FAM205BPQ63HN1 556 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 OAFQ86UD1 273 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 LRRC18Q8N456 261 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 FNDC8Q8TC99 324 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 KCNK17Q96T54 332 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 SYT3Q9BQG1 590 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 LRMDAQ9H2I8 198 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 MS4A5Q9H3V2 200 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 SIAEQ9HAT2 523 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 SPAG4Q9NPE6 437 aa21.7■■□□□ 1.06
VEGFA-230ENST00000640482 ABCA1O95477 2261 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 CHD3Q12873 2000 aaKnown RBP21.69■■□□□ 1.06
VEGFA-230ENST00000640482 APEHP13798 732 aaKnown RBP21.69■■□□□ 1.06
VEGFA-230ENST00000640482 FUT4P22083 530 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 CHRFAM7AQ494W8 412 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 MBOAT2Q6ZWT7 520 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 RRM2BQ7LG56 351 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 CPLX4Q7Z7G2 160 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 OR51A7Q8NH64 312 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 UBASH3BQ8TF42 649 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 NMD3Q96D46 503 aaKnown RBP21.69■■□□□ 1.06
VEGFA-230ENST00000640482 RBP7Q96R05 134 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 BPESC1Q9GZL8 116 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 TPK1Q9H3S4 243 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 ANKRD19PQ9H560 264 aa21.69■■□□□ 1.06
VEGFA-230ENST00000640482 ZNF346Q9UL40 294 aaKnown RBP21.69■■□□□ 1.06
VEGFA-230ENST00000640482 TRAV27A0A087WT01 109 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 A0A087WUU8 490 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 SNX3O60493 162 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 GMNNO75496 209 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 PRSS23O95084 383 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 IGFBP1P08833 259 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-230ENST00000640482 NCK1P16333 377 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 ZNF16P17020 682 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-230ENST00000640482 GIFP27352 417 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 HSF2Q03933 536 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 FMODQ06828 376 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 THEM4Q5T1C6 240 aa21.68■■□□□ 1.06
VEGFA-230ENST00000640482 RGS7BPQ6MZT1 257 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-230ENST00000640482 ZNF786Q8N393 782 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms