RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 UQCRFS1P1P0C7P4 283 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 ZNF735P0CB33 412 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 UBTFL1P0CB47 393 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-216ENST00000640058 ZNF43P17038 809 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 RDXP35241 583 aaKnown RBP2.29□□□□□ -2.04
CCDC7-216ENST00000640058 ATP5IP56385 69 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-216ENST00000640058 IDI1Q13907 227 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 ZNF880Q6PDB4 577 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 FAM228AQ86W67 206 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 SLC22A9Q8IVM8 553 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 ZNF547Q8IVP9 402 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 ZADH2Q8N4Q0 377 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 SLC2A14Q8TDB8 520 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 N4BP2L2Q92802 583 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-216ENST00000640058 IFT74Q96LB3 600 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 SORT1Q99523 831 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 KCTD14Q9BQ13 255 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-216ENST00000640058 SLCO1B3Q9NPD5 702 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 ADAP2Q9NPF8 381 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 SPATA7Q9P0W8 599 aa2.29□□□□□ -2.04
CCDC7-216ENST00000640058 RRP15Q9Y3B9 282 aaKnown RBP2.29□□□□□ -2.04
CCDC7-216ENST00000640058 KIR2DS1A0A191URI9 304 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 C7orf66A4D0T2 115 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 TRIM64CA6NLI5 447 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 CCL21O00585 134 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 IGHV3-43DP0DP04 118 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 MCF2P10911 925 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 TCN1P20061 433 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-216ENST00000640058 HSD17B2P37059 387 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 GPR6P46095 362 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-216ENST00000640058 FGF8P55075 233 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-216ENST00000640058 KCNJ2P63252 427 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 FZD2Q14332 565 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 KIR2DS1Q14954 304 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 PRR9Q5T870 116 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 LCN12Q6JVE5 192 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 LRRC74BQ6ZQY2 392 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 SHISA6Q6ZSJ9 500 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 Q6ZSR3 168 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 TAS2R42Q7RTR8 314 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 OR1N2Q8NGR9 330 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 OR52P1PQ8NH57 321 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 AKR7LQ8NHP1 331 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 RAB3IL1Q8TBN0 382 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 RNF139Q8WU17 664 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 DNAJC19Q96DA6 116 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 CNDP1Q96KN2 507 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 MYCBPQ99417 103 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-216ENST00000640058 TCHPQ9BT92 498 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 PKIBQ9C010 78 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 MRPL47Q9HD33 250 aaKnown RBP2.28□□□□□ -2.04
CCDC7-216ENST00000640058 TM9SF3Q9HD45 589 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 SLC40A1Q9NP59 571 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 ETNK2Q9NVF9 386 aa2.28□□□□□ -2.04
CCDC7-216ENST00000640058 CSDC2Q9Y534 153 aaKnown RBP2.28□□□□□ -2.04
CCDC7-216ENST00000640058 IGKV1D-13A0A0B4J2D9 117 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 PLAC8L1A1L4L8 177 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 CCDC169A6NNP5 214 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 AP3B1O00203 1094 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 PEX7O00628 323 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 PSTPIP1O43586 416 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 MGRN1O60291 552 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 RCBTB2O95199 551 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 GKN3PP0CG01 181 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 IGKV1-13P0DP09 117 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 HPGDP15428 266 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 CASP14P31944 242 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 RORAP35398 523 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 SUB1P53999 127 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC7-216ENST00000640058 PRMT2P55345 433 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 PDIA2Q13087 525 aaKnown RBP2.27□□□□□ -2.05
CCDC7-216ENST00000640058 ARHGAP19Q14CB8 494 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 SGCAQ16586 387 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 GUCA2BQ16661 112 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 TMEM107Q6UX40 140 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 KDM7AQ6ZMT4 941 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 NANOGNBQ7Z5D8 188 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 LHFPL3Q86UP9 236 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 CALHM3Q86XJ0 350 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 OR2G3Q8NGZ4 309 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 KCNG3Q8TAE7 436 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 PLPPR1Q8TBJ4 325 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 RASD2Q96D21 266 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 TMEM59Q9BXS4 323 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 ILKAPQ9H0C8 392 aaPredicted RBP2.27□□□□□ -2.05
CCDC7-216ENST00000640058 SPNS1Q9H2V7 528 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 UGT1A7Q9HAW7 530 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 UGT1A10Q9HAW8 530 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 UGT1A8Q9HAW9 530 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 NOX3Q9HBY0 568 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 NMRK1Q9NWW6 199 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 KLHL28Q9NXS3 571 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 GGA2Q9UJY4 613 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 RABL2BQ9UNT1 228 aa2.27□□□□□ -2.05
CCDC7-216ENST00000640058 DOCK9Q9BZ29 2069 aa2.26□□□□□ -2.05
CCDC7-216ENST00000640058 A0A1W2PP18 115 aa2.26□□□□□ -2.05
CCDC7-216ENST00000640058 ZNF726A6NNF4 738 aa2.26□□□□□ -2.05
CCDC7-216ENST00000640058 GOSR2O14653 212 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms