RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 GDPD1Q8N9F7 314 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 SLCO4A1Q96BD0 722 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 CENPOQ9BU64 300 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
SCARB2-215ENST00000639145 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
SCARB2-215ENST00000639145 B3GALT5Q9Y2C3 310 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 NKX2-2O95096 273 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 MSR1P21757 451 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 BDKRB2P30411 391 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 SDHAP31040 664 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 VEGFCP49767 419 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 SPCS2Q15005 226 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 RIMKLAQ8IXN7 391 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-215ENST00000639145 LYRM1O43325 122 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 LTBRP36941 435 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 ALKBH1Q13686 389 aaKnown RBP12.39□□□□□ -0.43
SCARB2-215ENST00000639145 PPA1Q15181 289 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 PLEKHN1Q494U1 663 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-215ENST00000639145 CMPK2Q5EBM0 449 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 ANKRD37Q7Z713 158 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 TMEM179BQ7Z7N9 219 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 WFDC8Q8IUA0 241 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 ZNF709Q8N972 641 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 CREB3L1Q96BA8 519 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 WDR34Q96EX3 536 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 VRK1Q99986 396 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-215ENST00000639145 TMEM59Q9BXS4 323 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 CMC2Q9NRP2 79 aa12.39□□□□□ -0.43
SCARB2-215ENST00000639145 SLC33A1O00400 549 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-215ENST00000639145 GABRA5P31644 462 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 HOXD12P35452 270 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 AIMP2Q13155 320 aaKnown RBP12.38□□□□□ -0.43
SCARB2-215ENST00000639145 MEX3BQ6ZN04 569 aaKnown RBP12.38□□□□□ -0.43
SCARB2-215ENST00000639145 PLPP7Q8NBV4 271 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 CMSS1Q9BQ75 279 aaKnown RBP12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SLC19A3Q9BZV2 496 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SELENOIQ9C0D9 397 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 ASPDHA6ND91 283 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 ANKRD61A6NGH8 418 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 F5H0A9 414 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SLC34A2O95436 690 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SERPINE2P07093 398 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 APEHP13798 732 aaKnown RBP12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SPI1P17947 270 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 TMPRSS7Q7RTY8 843 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 CMTM1Q8IZ96 169 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 GCNT2Q8N0V5 402 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 BEST3Q8N1M1 668 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 HMGCLL1Q8TB92 370 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 MNTQ99583 582 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 UFSP2Q9NUQ7 469 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SLC22A20A6NK97 555 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 FZD7O75084 574 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 NXPH2O95156 264 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 EPHA1P21709 976 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 DNASE1P24855 282 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 TNFSF8P32971 234 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 SLC16A9Q7RTY1 509 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 MSRB3Q8IXL7 192 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 GALNT16Q8N428 558 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 INTS12Q96CB8 462 aaKnown RBP12.38□□□□□ -0.43
SCARB2-215ENST00000639145 B3GNT2Q9NY97 397 aa12.38□□□□□ -0.43
SCARB2-215ENST00000639145 TRGV5A0A0B4J1U4 118 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 ZNF891A8MT65 544 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-215ENST00000639145 NOTOA8MTQ0 251 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 PRKACBP22694 351 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 MRPL19P49406 292 aaKnown RBP12.37□□□□□ -0.43
SCARB2-215ENST00000639145 ISL1P61371 349 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 LSAMPQ13449 338 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 CCDC58Q4VC31 144 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 ZNF766Q5HY98 468 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 PAQR6Q6TCH4 344 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 SLC46A3Q7Z3Q1 461 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 STX12Q86Y82 276 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 COQ8AQ8NI60 647 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 THAP7Q9BT49 309 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-215ENST00000639145 PROCRQ9UNN8 238 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 CKAP5Q14008 2032 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 MPPED1O15442 326 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 HYAL3O43820 417 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-215ENST00000639145 WNT11O96014 354 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 SOD1P00441 154 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 HNRNPFP52597 415 aaKnown RBP12.37□□□□□ -0.43
SCARB2-215ENST00000639145 UBE2IP63279 158 aaKnown RBP12.37□□□□□ -0.43
SCARB2-215ENST00000639145 SSPNQ14714 243 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 ANKRD13BQ86YJ7 626 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 LACC1Q8IV20 430 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 BBS1Q8NFJ9 593 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 OR11L1Q8NGX0 322 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 OR4K15Q8NH41 348 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 CT55Q8WUE5 264 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 BCL7BQ9BQE9 202 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 ACOXLQ9NUZ1 547 aa12.37□□□□□ -0.43
SCARB2-215ENST00000639145 GPATCH2Q9NW75 528 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms