RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	SPHAR	Q15513	63 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	MED22	Q15528	200 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	C3AR1	Q16581	482 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	KRTCAP3	Q53RY4	240 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	CARD17	Q5XLA6	110 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	FAM180A	Q6UWF9	173 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	TMPRSS11A	Q6ZMR5	421 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	AAED1	Q7RTV5	226 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	EGFL6	Q8IUX8	553 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	ERI1	Q8IV48	349 aa	Known RBP	10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	GLB1L2	Q8IW92	636 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	TIGD4	Q8IY51	512 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	TMEM123	Q8N131	208 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	KLHL36	Q8N4N3	616 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	OR6N1	Q8NGY5	312 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	OR52N1	Q8NH53	320 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	TMEM45B	Q96B21	275 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	INTS14	Q96SY0	518 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF649	Q9BS31	505 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	ISYNA1	Q9NPH2	558 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF71	Q9NQZ8	489 aa	Predicted RBP	10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	PARPBP	Q9NWS1	579 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	TAS2R16	Q9NYV7	291 aa		10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	COA3	Q9Y2R0	106 aa	Predicted RBP	10.45	□□□□□ -0.74
CLN6-223	ENST00000637823	CELSR3	Q9NYQ7	3312 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823		A0A1B0GTH9	108 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823		A0A1W2PQL4	384 aa	Predicted RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	TVP23A	A6NH52	213 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	AHRR	A9YTQ3	701 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823		H3BSA7	217 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	SLC43A1	O75387	559 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	WISP2	O76076	250 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	HLA-DQA2	P01906	255 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	TF	P02787	698 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	HRG	P04196	525 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	QDPR	P09417	244 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	FCGR2A	P12318	317 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	NAA10	P41227	235 aa	Predicted RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	CAPZA2	P47755	286 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	HCCS	P53701	268 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	FMOD	Q06828	376 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	ETFDH	Q16134	617 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	TIGD6	Q17RP2	521 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	LRFN4	Q6PJG9	635 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	LYPD4	Q6UWN0	246 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	ADGRE4P	Q86SQ3	457 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	CDC20B	Q86Y33	519 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	MCEMP1	Q8IX19	187 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	C20orf196	Q8IYI0	205 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF485	Q8NCK3	441 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	FNDC9	Q8TBE3	224 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	ABHD3	Q8WU67	409 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	MCHR2	Q969V1	340 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF775	Q96BV0	537 aa	Predicted RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	DGCR14	Q96DF8	476 aa	Known RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	GPR137	Q96N19	417 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	DOCK7	Q96N67	2140 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	OR5M11	Q96RB7	305 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	TBX5	Q99593	518 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	MGLL	Q99685	303 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	ALG8	Q9BVK2	526 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	PRORY	Q9H606	182 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	WDR76	Q9H967	626 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	BCO1	Q9HAY6	547 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	GP6	Q9HCN6	339 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	B3GAT2	Q9NPZ5	323 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	ING1	Q9UK53	422 aa	Predicted RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	NOSIP	Q9Y314	301 aa	Known RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	TMEM14A	Q9Y6G1	99 aa		10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	NCOA6	Q14686	2063 aa	Predicted RBP	10.44	□□□□□ -0.74
CLN6-223	ENST00000637823	CACNA1C	Q13936	2221 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	FREM1	Q5H8C1	2179 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	IGKV1D-43	A0A0B4J1Z2	117 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	OR6C65	A6NJZ3	312 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	SLC22A20	A6NK97	555 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF670-ZNF695	F2Z2N8	137 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF593	O00488	134 aa	Predicted RBP	10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	PHYH	O14832	338 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	AQP8	O94778	261 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	GPANK1	O95872	356 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	YES1	P07947	543 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF823	P16415	610 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	LAP3	P28838	519 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	NTF4	P34130	210 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	SELENOP	P49908	381 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ACTA2	P62736	377 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ACTG2	P63267	376 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF85	Q03923	595 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ACSM1	Q08AH1	577 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	KCNMB1	Q16558	191 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ARMCX4	Q5H9R4	360 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	TEX30	Q5JUR7	227 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	C10orf128	Q5T292	105 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	OR2G6	Q5TZ20	316 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.43	□□□□□ -0.74
CLN6-223	ENST00000637823	KCTD20	Q7Z5Y7	419 aa		10.43	□□□□□ -0.74
CLN6-223	ENST00000637823		Q8NA96	180 aa		10.43	□□□□□ -0.74

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