RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZNF749O43361 778 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR2T7P0C7T2 308 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 PVRP15151 417 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 DUSP1P28562 367 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 ERVPABLB-1P60509 514 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 RHOBP62745 196 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 KCNJ10P78508 379 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 RPE65Q16518 533 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SOHLH1Q5JUK2 328 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 B3GNTL1Q67FW5 361 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 WDR88Q6ZMY6 472 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 SYT9Q86SS6 491 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 MAML2Q8IZL2 1156 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 BHLHE23Q8NDY6 225 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR13J1Q8NGT2 312 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 NETO1Q8TDF5 533 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 FUBP1Q96AE4 644 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 BORCS6Q96GS4 357 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 TAAR6Q96RI8 345 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 PRRX2Q99811 253 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 AMBRA1Q9C0C7 1298 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 VRTNQ9H8Y1 702 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 EXOSC3Q9NQT5 275 aaKnown RBP5.13□□□□□ -1.59
SCN1A-209ENST00000635750 UFSP2Q9NUQ7 469 aa5.13□□□□□ -1.59
SCN1A-209ENST00000635750 OR7C2O60412 319 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PMP2P02689 132 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 APOBEC1P41238 236 aaKnown RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 CLINT1Q14677 625 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 Q56UQ5 140 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 CPZQ66K79 652 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SFXN4Q6P4A7 337 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 MDGA2Q7Z553 956 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 LSRQ86X29 649 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PRSS35Q8N3Z0 413 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SEC22CQ9BRL7 303 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 C16orf70Q9BSU1 422 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 DUSP22Q9NRW4 184 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 FGF21Q9NSA1 209 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 RYDENQ9NUL5 291 aaKnown RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PPT2Q9UMR5 302 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 AMMECR1Q9Y4X0 333 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PTGDR2Q9Y5Y4 395 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM131LA2VDJ0 1609 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 STMND1H3BQB6 276 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PENKP01210 267 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 CNR1P21554 472 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PRLHRP49683 370 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 VRK2Q86Y07 508 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 KLHDC8BQ8IXV7 354 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 LFNGQ8NES3 379 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SMIM12Q96EX1 92 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 HS3ST3A1Q9Y663 406 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF816-ZNF321PA0A0X1KG74 233 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 AQP7P3A6NL99 342 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 ADAM12O43184 909 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 MT-ATP6P00846 226 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 EN2P19622 333 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 APEX1P27695 318 aaKnown RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 ADRA1AP35348 466 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF85Q03923 595 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PGGHGQ32M88 737 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PHLDA2Q53GA4 152 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 BEX5Q5H9J7 111 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PLAC9Q5JTB6 97 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 TXNRD3NBQ6F5E7 133 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 DGAT2L7PQ6IED9 249 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SIRT6Q8N6T7 355 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SLC24A4Q8NFF2 622 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 ALG12Q9BV10 488 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 NOX4Q9NPH5 578 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 RGPD1P0DJD0 1748 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 F5H697 171 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 RFXAPO00287 272 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PPIHO43447 177 aaKnown RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 XRCC2O43543 280 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 GPRIN2O60269 458 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 FGF3P11487 239 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PPP3CBP16298 524 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 NPY1RP25929 384 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SMAGPQ0VAQ4 97 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 FCRLAQ7L513 359 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SSX9Q7RTT3 188 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 PQLC3Q8N755 202 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SIGLECL1Q8N7X8 197 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 LILRB1Q8NHL6 650 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 KISS1RQ969F8 398 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-209ENST00000635750 OR2M2Q96R28 347 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 RAB1BQ9H0U4 201 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 GAL3ST2Q9H3Q3 398 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 OCEL1Q9H607 264 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 SIAEQ9HAT2 523 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 ASIC5Q9NY37 505 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 CACNA1SQ13698 1873 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 A0A0B4J2A0 478 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 TRAPPC2P0DI81 140 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 TRAPPC2BP0DI82 140 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 GCSHP23434 173 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 RAB1AP62820 205 aa5.12□□□□□ -1.59
SCN1A-209ENST00000635750 ZXDBP98169 803 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms