RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SEC14L5O43304 696 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 NME2P1O60361 137 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SCG5P05408 212 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PSKH1P11801 424 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 NME2P22392 152 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 GADD45AP24522 165 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PYCR1P32322 319 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 RFC3P40938 356 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 HCCSP53701 268 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 GFRA1P56159 465 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 CLDN15P56746 228 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 RAP1BP61224 184 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 RAP1AP62834 184 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 CSNK2A1P68400 391 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 HSF1Q00613 529 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ZNF85Q03923 595 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 MLLT11Q13015 90 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 MELKQ14680 651 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SPCS2Q15005 226 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 TSTQ16762 297 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 FAM205BPQ63HN1 556 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 TMEM225Q6GV28 225 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 MTFR2Q6P444 385 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 TMPRSS11AQ6ZMR5 421 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 GALNTL5Q7Z4T8 443 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PM20D2Q8IYS1 436 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 OR10H4Q8NGA5 316 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 OR52N1Q8NH53 320 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ASB10Q8WXI3 467 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 HAS2Q92819 552 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 TXNDC15Q96J42 360 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 KLHL15Q96M94 604 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SFXN2Q96NB2 322 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 TBX5Q99593 518 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ALG12Q9BV10 488 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 ISG20L2Q9H9L3 353 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 SRA1Q9HD15 236 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 CAB39Q9Y376 341 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 NOX1Q9Y5S8 564 aa8.47□□□□□ -1.05
PDLIM5-223ENST00000627587 PHF3Q92576 2039 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 A0A0J9YW62 118 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 FAM171A2A8MVW0 826 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 PRR32B1ATL7 298 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 SELENOFO60613 162 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 EIF1BO60739 113 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 GPANK1O95872 356 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 CELA3AP09093 270 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 IFNGR1P15260 489 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 CLDN20P56880 219 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 RIPPLY3P57055 190 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 PLGLB1Q02325 96 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 GALEQ14376 348 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 WIPI1Q5MNZ9 446 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 EEF1A1P5Q5VTE0 462 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 VASNQ6EMK4 673 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 GPAT4Q86UL3 456 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 UEVLDQ8IX04 471 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 GATAD2BQ8WXI9 593 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 TSC22D3Q99576 134 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 SLX1AQ9BQ83 275 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 ALG8Q9BVK2 526 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 TTTY12Q9BZ98 90 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 NUAK2Q9H093 628 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 ISYNA1Q9NPH2 558 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 MED29Q9NX70 200 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 VSX1Q9NZR4 365 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 FKBP7Q9Y680 259 aa8.46□□□□□ -1.06
PDLIM5-223ENST00000627587 IGLV1-36A0A0B4J1U3 117 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TRAV17A0A0B4J275 112 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 A0A1W2PQL4 384 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 AQP7P3A6NL99 342 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 PRSS44E7EML9 344 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 LINC01387J3KSC0 135 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC22A1O15245 554 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TRAF3IP2O43734 574 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 AIREO43918 545 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 GLSO94925 669 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 OR2T7P0C7T2 308 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 CTLA4P16410 223 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF43P17038 809 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 PTGER4P35408 488 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 NAA10P41227 235 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SUCLG1P53597 346 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SH3BGRP55822 239 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 NCS1P62166 190 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TIMM50Q3ZCQ8 353 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF322Q6U7Q0 402 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 HDDC2Q7Z4H3 204 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZBTB46Q86UZ6 589 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ERI1Q8IV48 349 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 PHC2Q8IXK0 858 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TIGD4Q8IY51 512 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF511Q8NB15 262 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TMEM178AQ8NBL3 297 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 OR2T27Q8NH04 317 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZHX1-C8orf76Q96EF9 292 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SCMH1Q96GD3 660 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ADGRG7Q96K78 797 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms