RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HPF1Q9NWY4 346 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 FARSAQ9Y285 508 aaKnown RBP19.77■□□□□ 0.76
PNKP-220ENST00000627232 COA3Q9Y2R0 106 aaPredicted RBP19.77■□□□□ 0.76
PNKP-220ENST00000627232 R4GN57 208 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 A0A1W2PPK0 400 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 CCL3P10147 92 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 RBMS1P29558 406 aaKnown RBP19.76■□□□□ 0.75
PNKP-220ENST00000627232 TALDO1P37837 337 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 RANBP1P43487 201 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 CCR9P51686 369 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 ADAM8P78325 824 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 ETFDHQ16134 617 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 CCDC157Q569K6 752 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 TEX30Q5JUR7 227 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 HDDC2Q7Z4H3 204 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 THRSPQ92748 146 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 AMELYQ99218 206 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 PROK2Q9HC23 129 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 B3GAT1Q9P2W7 334 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 EXTL2Q9UBQ6 330 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 TEKT2Q9UIF3 430 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 SPARCP09486 303 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 SLC2A2P11168 524 aaPredicted RBP19.76■□□□□ 0.75
PNKP-220ENST00000627232 OTX2P32243 289 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 RPS27P42677 84 aaKnown RBP19.76■□□□□ 0.75
PNKP-220ENST00000627232 P2RY4P51582 365 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 DSCR4P56555 118 aaPredicted RBP19.76■□□□□ 0.75
PNKP-220ENST00000627232 OR2B6P58173 313 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 EIF3IQ13347 325 aaKnown RBP19.76■□□□□ 0.75
PNKP-220ENST00000627232 P2RY14Q15391 338 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 MEP1BQ16820 701 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 PCK2Q16822 640 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 H3F3CQ6NXT2 135 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 UEVLDQ8IX04 471 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 Q8N402 240 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 SAMD12Q8N8I0 201 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 SLC26A10Q8NG04 563 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 TMEM41AQ96HV5 264 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 SGCZQ96LD1 299 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 CMTM3Q96MX0 182 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 OR5B2Q96R09 309 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 ELOVL3Q9HB03 270 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 SACM1LQ9NTJ5 587 aa19.76■□□□□ 0.75
PNKP-220ENST00000627232 CCDC187A0A096LP49 1063 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 LOC102725191A0A1B0GVB3 256 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 ZNF254O75437 659 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 HRGP04196 525 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 EIF4EP06730 217 aaKnown RBP19.75■□□□□ 0.75
PNKP-220ENST00000627232 LIFP15018 202 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 DPP4P27487 766 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 RPS18P62269 152 aaKnown RBP19.75■□□□□ 0.75
PNKP-220ENST00000627232 RPS15P62841 145 aaKnown RBP19.75■□□□□ 0.75
PNKP-220ENST00000627232 SF3A2Q15428 464 aaKnown RBP19.75■□□□□ 0.75
PNKP-220ENST00000627232 TRIQKQ629K1 86 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 ZNF544Q6NX49 715 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 OR1J4Q8NGS1 313 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 RNF128Q8TEB7 428 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 TXNDC15Q96J42 360 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 C4orf45Q96LM5 186 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 KCNJ15Q99712 375 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 SLC22A4Q9H015 551 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 B3GAT2Q9NPZ5 323 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 MED29Q9NX70 200 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 KLHL9Q9P2J3 617 aa19.75■□□□□ 0.75
PNKP-220ENST00000627232 ING1Q9UK53 422 aaPredicted RBP19.75■□□□□ 0.75
PNKP-220ENST00000627232 PMS2P1A4D2B8 440 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 ACOD1A6NK06 481 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 AQP8O94778 261 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 RAF1P04049 648 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 ZNF823P16415 610 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 ATF1P18846 271 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 RFX2P48378 723 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 BIDP55957 195 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 SLC35A1P78382 337 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 EIF2B1Q14232 305 aaKnown RBP19.74■□□□□ 0.75
PNKP-220ENST00000627232 LRRC69Q6ZNQ3 347 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 NRARPQ7Z6K4 114 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 OR5M1Q8NGP8 315 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 MIB2Q96AX9 1013 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 OXGR1Q96P68 337 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 RBP7Q96R05 134 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 ABHD6Q9BV23 337 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 SLITRK2Q9H156 845 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 TMEM9BQ9NQ34 198 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 MALT1Q9UDY8 824 aa19.74■□□□□ 0.75
PNKP-220ENST00000627232 AK6Q9Y3D8 172 aaKnown RBP19.74■□□□□ 0.75
PNKP-220ENST00000627232 A0A1W2PNR3 127 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 C9orf172C9J069 976 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 PMS2P2O95744 297 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 MT-CO3P00414 261 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 FOXK1P85037 733 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 TAB1Q15750 504 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 TMEM176BQ3YBM2 270 aaPredicted RBP19.73■□□□□ 0.75
PNKP-220ENST00000627232 LRRN1Q6UXK5 716 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 KRT77Q7Z794 578 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 PRSS35Q8N3Z0 413 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 ESX1Q8N693 406 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 ZNF676Q8N7Q3 588 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 C19orf18Q8NEA5 215 aa19.73■□□□□ 0.75
PNKP-220ENST00000627232 OR4M1Q8NGD0 313 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms