RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 C1orf189Q5VU69 101 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM64Q6YI46 380 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF793Q6ZN11 406 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM182Q6ZP80 229 aaPredicted RBP10.5□□□□□ -0.73
LINC00538-201ENST00000626109 GDPD3Q7L5L3 318 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 PRSS41Q7RTY9 318 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 LUZP2Q86TE4 346 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ACOT4Q8N9L9 421 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 C19orf18Q8NEA5 215 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 SLC7A13Q8TCU3 470 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 SFXN5Q8TD22 340 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 GPX8Q8TED1 209 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 OMA1Q96E52 524 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 C4orf36Q96KX1 117 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 NRSN2Q9GZP1 204 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 HRH4Q9H3N8 390 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ISYNA1Q9NPH2 558 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 LHX9Q9NQ69 397 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 NAGKQ9UJ70 344 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 ADAM30Q9UKF2 790 aa10.5□□□□□ -0.73
LINC00538-201ENST00000626109 IQCMA0A1B0GVH7 501 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 SGK494L7N484 410 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 SELENOFO60613 162 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 RDH16O75452 317 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 STK17BO94768 372 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 KLK3P07288 261 aaPredicted RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF28P17035 718 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 PSMB6P28072 239 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 RPS19P39019 145 aaKnown RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 FEN1P39748 380 aaKnown RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 CRYBB2P43320 205 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 NCBP2P52298 156 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 RAB4BP61018 213 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 RPS15P62841 145 aaKnown RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 SNRPNP63162 240 aaKnown RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 ENTPD8Q5MY95 495 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 PODNL1Q6PEZ8 512 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 LAPTM4BQ86VI4 370 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 PRSS58Q8IYP2 241 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 HSD17B8Q92506 261 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 NXPE2Q96DL1 559 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 THOC3Q96J01 351 aaKnown RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 AMDHD1Q96NU7 426 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 GLIPR2Q9H4G4 154 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 BCO1Q9HAY6 547 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 MKKSQ9NPJ1 570 aaPredicted RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 YAE1D1Q9NRH1 226 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 LYARQ9NX58 379 aaKnown RBP10.49□□□□□ -0.73
LINC00538-201ENST00000626109 CALML5Q9NZT1 146 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 A4GNTQ9UNA3 340 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 CMAHPQ9Y471 501 aa10.49□□□□□ -0.73
LINC00538-201ENST00000626109 A0A0A6YYD5 115 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 MARCH11A6NNE9 402 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 TMPRSS11DO60235 418 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 TSPAN19P0C672 248 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 MALP21145 153 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 FBLP22087 321 aaKnown RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SOX3P41225 446 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 OR1D4P47884 311 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 OR2B6P58173 313 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 RAB11AP62491 216 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 DCDP81605 110 aaKnown RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 RAB40BQ12829 278 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SLAMF1Q13291 335 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 GINS1Q14691 196 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 RAB11BQ15907 218 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SNAPC1Q16533 368 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SYPL1Q16563 259 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM44Q2T9K0 475 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 AGAP6Q5VW22 663 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 OR5M10Q6IEU7 315 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM108Q6UXF1 575 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 HSDL2Q6YN16 418 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 RRM2BQ7LG56 351 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 RBM45Q8IUH3 476 aaKnown RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 FAM58AQ8N1B3 248 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 CLDN22Q8N7P3 220 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SLC38A9Q8NBW4 561 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 OR4K5Q8NGD3 323 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 OR56A1Q8NGH5 318 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 GNPDA2Q8TDQ7 276 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 GRHL3Q8TE85 626 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 AP3S1Q92572 193 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 BSCL2Q96G97 398 aaPredicted RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SLC46A1Q96NT5 459 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 AGAP4Q96P64 663 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SLC38A2Q96QD8 506 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 BCL2L14Q9BZR8 327 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 FOXJ2Q9P0K8 574 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 PHF11Q9UIL8 331 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 KLK13Q9UKR3 277 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 GSTK1Q9Y2Q3 226 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 PTPRBP23467 1997 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 CDRT15L2A8MXV6 281 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 B8ZZF3 427 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SMLR1H3BR10 107 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 CCNKO75909 580 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 DHFRP00374 187 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 HNF1AP20823 631 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 CD82P27701 267 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms