RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SEC61A2Q9H9S3 476 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 NOX3Q9HBY0 568 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 GDF2Q9UK05 429 aaPredicted RBP19.36■□□□□ 0.69
SF1-220ENST00000626028 RTTNQ86VV8 2226 aa19.36■□□□□ 0.69
SF1-220ENST00000626028 OR4A8P0C604 315 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 NR4A1P22736 598 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 GIPRP48546 466 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 PPOXP50336 477 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 CTXN1P60606 82 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 LSM11P83369 360 aaKnown RBP eCLIP19.35■□□□□ 0.69
SF1-220ENST00000626028 MXRA7P84157 204 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 PIGFQ07326 219 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 FHL1Q13642 323 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 DAG1Q14118 895 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 ZBED5Q49AG3 693 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 DEFB107AQ8IZN7 70 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 LRRC75AQ8NAA5 344 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 SYT14Q8NB59 555 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 POP5Q969H6 163 aaKnown RBP19.35■□□□□ 0.69
SF1-220ENST00000626028 NSMCE2Q96MF7 247 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 RBP7Q96R05 134 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 RHNO1Q9BSD3 238 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 SIAEQ9HAT2 523 aa19.35■□□□□ 0.69
SF1-220ENST00000626028 HIVEP2P31629 2446 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 ABCA1O95477 2261 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 SSX4O60224 188 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 NDUFS7O75251 213 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 F12P00748 615 aaPredicted RBP19.34■□□□□ 0.69
SF1-220ENST00000626028 SEMG1P04279 462 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 TCN1P20061 433 aaPredicted RBP19.34■□□□□ 0.69
SF1-220ENST00000626028 FUT4P22083 530 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 EVX1P49640 407 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 VLDLRP98155 873 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 TMEM53Q6P2H8 277 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 PODNL1Q6PEZ8 512 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 CLEC2AQ6UVW9 174 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 CCDC197Q8NCU1 140 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 RBM15BQ8NDT2 890 aaKnown RBP19.34■□□□□ 0.69
SF1-220ENST00000626028 OR4K5Q8NGD3 323 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 OR51A7Q8NH64 312 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 HDAC2Q92769 488 aaKnown RBP19.34■□□□□ 0.69
SF1-220ENST00000626028 MCUR1Q96AQ8 359 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 FBXO17Q96EF6 278 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 TNFRSF13CQ96RJ3 184 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 KCNN2Q9H2S1 579 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 MYOZ1Q9NP98 299 aaPredicted RBP19.34■□□□□ 0.69
SF1-220ENST00000626028 FKBP7Q9Y680 259 aa19.34■□□□□ 0.69
SF1-220ENST00000626028 SLC22A23A1A5C7 686 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 ARPC2O15144 300 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 RPS23P62266 143 aaKnown RBP19.33■□□□□ 0.68
SF1-220ENST00000626028 TBPL2Q6SJ96 375 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 SLC16A14Q7RTX9 510 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 FAM86B1Q8N7N1 296 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 ARIH2OSQ8N7S6 290 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 OR10H5Q8NGA6 315 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 OR13C2Q8NGS9 318 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 ZNF519Q8TB69 540 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 NSL1Q96IY1 281 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 SMR3AQ99954 134 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 REG4Q9BYZ8 158 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 MUC13Q9H3R2 512 aa19.33■□□□□ 0.68
SF1-220ENST00000626028 ZNF346Q9UL40 294 aaKnown RBP19.33■□□□□ 0.68
SF1-220ENST00000626028 TRAV27A0A087WT01 109 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 CDC42EP2O14613 210 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 LY6G6DO95868 133 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 CD14P08571 375 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 CALB2P22676 271 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 THBS4P35443 961 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 GLRXP35754 106 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 LIMS1P48059 325 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 GALK2Q01415 458 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 PLP2Q04941 152 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 CD47Q08722 323 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 SNTB2Q13425 540 aaKnown RBP19.32■□□□□ 0.68
SF1-220ENST00000626028 IQCCQ4KMZ1 466 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 MTX3Q5HYI7 312 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 FGD3Q5JSP0 725 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 SLC25A47Q6Q0C1 308 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 OR1J2Q8NGS2 313 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 MS4A3Q96HJ5 214 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 SH3GL3Q99963 347 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 IL1RAPQ9NPH3 570 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 SLC7A8Q9UHI5 535 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 CMAHPQ9Y471 501 aa19.32■□□□□ 0.68
SF1-220ENST00000626028 hCG_2039718K7EN88 272 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 SMAD7O15105 426 aaKnown RBP19.31■□□□□ 0.68
SF1-220ENST00000626028 SNAP29O95721 258 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 ERCC1P07992 297 aaPredicted RBP19.31■□□□□ 0.68
SF1-220ENST00000626028 RPL4P36578 427 aaKnown RBP19.31■□□□□ 0.68
SF1-220ENST00000626028 GUCA1AP43080 201 aaPredicted RBP19.31■□□□□ 0.68
SF1-220ENST00000626028 GPR4P46093 362 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 OMPP47874 163 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 MYBPC1Q00872 1141 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 TOP3AQ13472 1001 aaPredicted RBP19.31■□□□□ 0.68
SF1-220ENST00000626028 FAM27BQ5VT28 67 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 GPR139Q6DWJ6 353 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 VHLLQ6RSH7 139 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 ZNF584Q8IVC4 421 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 TSPAN32Q96QS1 320 aa19.31■□□□□ 0.68
SF1-220ENST00000626028 GPX7Q96SL4 187 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms