RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 PNMA6AP0CW24 399 aaPredicted RBP2.63□□□□□ -1.99
CDR1-202ENST00000625883 SMIM10L1P0DMW3 83 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 ZNF24P17028 368 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 NAA10P41227 235 aaPredicted RBP2.63□□□□□ -1.99
CDR1-202ENST00000625883 CXCL5P42830 114 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 TNNT2P45379 298 aaPredicted RBP2.63□□□□□ -1.99
CDR1-202ENST00000625883 SMARCB1Q12824 385 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 RCN1Q15293 331 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 CHRNA6Q15825 494 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 SPECC1LQ69YQ0 1117 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 CCDC73Q6ZRK6 1079 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 PEX26Q7Z412 305 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 MMAAQ8IVH4 418 aaKnown RBP2.63□□□□□ -1.99
CDR1-202ENST00000625883 STPG2Q8N412 459 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 LIX1Q8N485 282 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 CXorf40AQ8TE69 158 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 GIMAP1Q8WWP7 306 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 SMIM10Q96HG1 83 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 PKNOX2Q96KN3 472 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 ZNF578Q96N58 590 aaPredicted RBP2.63□□□□□ -1.99
CDR1-202ENST00000625883 VPS37BQ9H9H4 285 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 NEK6Q9HC98 313 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 ZNF160Q9HCG1 818 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 RAB20Q9NX57 234 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 RBAKQ9NYW8 714 aaPredicted RBP2.63□□□□□ -1.99
CDR1-202ENST00000625883 SHPKQ9UHJ6 478 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 PITPNC1Q9UKF7 332 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 KIAA1257Q9ULG3 409 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 VANGL2Q9ULK5 521 aa2.63□□□□□ -1.99
CDR1-202ENST00000625883 WDR62O43379 1518 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 USP47Q96K76 1375 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 TRAV39A0A0B4J263 110 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 TRBV11-1A0A0K0K1C0 115 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 SMCO3A2RU48 225 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 CDC7O00311 574 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 XKRYO14609 159 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 EIF3HO15372 352 aaKnown RBP eCLIP2.62□□□□□ -1.99
CDR1-202ENST00000625883 TPM2P07951 284 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 HRH1P35367 487 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 ZNF136P52737 540 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 PRRX1P54821 245 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 NUTF2P61970 127 aaKnown RBP2.62□□□□□ -1.99
CDR1-202ENST00000625883 MECOMQ03112 1051 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 GBE1Q04446 702 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 MADCAM1Q13477 382 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 PON3Q15166 354 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 TTLL9Q3SXZ7 439 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 CERS6Q6ZMG9 384 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 H2AFVQ71UI9 128 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 SLC7A13Q8TCU3 470 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 CD300LFQ8TDQ1 290 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 PIK3IP1Q96FE7 263 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 ZNF285Q96NJ3 590 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 WFIKKN1Q96NZ8 548 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 TSSK3Q96PN8 268 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 P2RX4Q99571 388 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 MRPL37Q9BZE1 423 aaKnown RBP2.62□□□□□ -1.99
CDR1-202ENST00000625883 TMEM185BQ9H7F4 350 aa2.62□□□□□ -1.99
CDR1-202ENST00000625883 PRRC2AP48634 2157 aaKnown RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 NINLQ9Y2I6 1382 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 MTCL1Q9Y4B5 1905 aaKnown RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 A0A075B6Q4 140 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 ZNF816-ZNF321PA0A0X1KG74 233 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 LRRIQ3A6PVS8 624 aaPredicted RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 CHST1O43916 411 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 AIFM1O95831 613 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 SLC25A27O95847 323 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 ZDHHC11BP0C7U3 371 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 AK4P27144 223 aaPredicted RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 HOXA9P31269 272 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 OTX1P32242 354 aaPredicted RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 SLC7A9P82251 487 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 HMGCS1Q01581 520 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 SLC25A11Q02978 314 aaKnown RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 ECH1Q13011 328 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 SELENBP1Q13228 472 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 KCTD19Q17RG1 926 aaPredicted RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 SOHLH1Q5JUK2 328 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 Q6P435 159 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 TMEM179Q6ZVK1 233 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 MREGQ8N565 214 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 OR4C5Q8NGB2 326 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 OR5B3Q8NH48 314 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 ZNF502Q8TBZ5 544 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 FAM104AQ969W3 186 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 TAAR1Q96RJ0 339 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 TGS1Q96RS0 853 aaKnown RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 CHP1Q99653 195 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 C20orf24Q9BUV8 137 aa2.61□□□□□ -1.99
CDR1-202ENST00000625883 MRPS18BQ9Y676 258 aaKnown RBP2.61□□□□□ -1.99
CDR1-202ENST00000625883 CENPJQ9HC77 1338 aaPredicted RBP2.6□□□□□ -1.99
CDR1-202ENST00000625883 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.6□□□□□ -1.99
CDR1-202ENST00000625883 GLYATL1P3A0A0U1RQE8 302 aa2.6□□□□□ -1.99
CDR1-202ENST00000625883 CIB4A0PJX0 185 aa2.6□□□□□ -1.99
CDR1-202ENST00000625883 SMCO2A6NFE2 343 aa2.6□□□□□ -1.99
CDR1-202ENST00000625883 C11orf94C9JXX5 98 aa2.6□□□□□ -1.99
CDR1-202ENST00000625883 LSM1O15116 133 aaKnown RBP2.6□□□□□ -1.99
CDR1-202ENST00000625883 KMOO15229 486 aa2.6□□□□□ -1.99
CDR1-202ENST00000625883 DPM1O60762 260 aa2.6□□□□□ -1.99
CDR1-202ENST00000625883 CDH16O75309 829 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms