RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y CACNG2Q9Y698 323 aa13.8□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y MEGF8Q7Z7M0 2845 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y IQCMA0A1B0GVH7 501 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y HMGB1P1B2RPK0 211 aaPredicted RBP13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y J3QLI3 93 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y DHHO43323 396 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y TPST2O60704 377 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y DEAF1O75398 565 aaPredicted RBP13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y SERPINB7O75635 380 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y CH25HO95992 272 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y MT-ATP6P00846 226 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y QDPRP09417 244 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y ZNF250P15622 560 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y GPX2P18283 190 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y FPR2P25090 351 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y UCP2P55851 309 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y PLP2Q04941 152 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y ZP4Q12836 540 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y SCARB2Q14108 478 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y MOGQ16653 247 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y SLC36A2Q495M3 483 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y MMEL1Q495T6 779 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y LRFN4Q6PJG9 635 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y TREML1Q86YW5 311 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y ARMC8Q8IUR7 673 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y ZDHHC22Q8N966 263 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y OR1J2Q8NGS2 313 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y IKZF5Q9H5V7 419 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y SAP30LQ9HAJ7 183 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y ESM1Q9NQ30 184 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y NKIRAS2Q9NYR9 191 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y PPIAL4AQ9Y536 164 aa13.79□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y IGLV3-9A0A075B6K5 115 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y ISPDA4D126 451 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y PRSS23O95084 383 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y PTHP01270 115 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y IGHV2-5P01817 119 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y CCNOP22674 350 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y LCN2P80188 198 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y SWT1Q5T5J6 900 aaKnown RBP13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y DLEU7Q6UYE1 221 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y RBMS3Q6XE24 437 aaKnown RBP13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y RETREG3Q86VR2 466 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y SMYD1Q8NB12 490 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y HIPK4Q8NE63 616 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y OR1J1Q8NGS3 322 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y CCL17Q92583 94 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y SLC25A44Q96H78 314 aaPredicted RBP13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y MAGEB18Q96M61 343 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y MCHR1Q99705 422 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y GAL3ST1Q99999 423 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y CPPED1Q9BRF8 314 aaPredicted RBP13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y BCL2L14Q9BZR8 327 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y C1orf198Q9H425 327 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y EVA1AQ9H8M9 152 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y TAS2R5Q9NYW4 299 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y UBAP1Q9NZ09 502 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y LEF1Q9UJU2 399 aaPredicted RBP13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y ANGPT4Q9Y264 503 aa13.78□□□□□ -0.2
CD99-211ENST00000623253_PAR_Y M0R3H8 397 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y KPNA4O00629 521 aaPredicted RBP13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y SPRY3O43610 288 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y HIST1H2ABP04908 130 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y UMPSP11172 480 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y MAKP20794 623 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y ZNF81P51508 661 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y CLRN1P58418 232 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y UBA52P62987 128 aaKnown RBP13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y RUNDC3AQ59EK9 446 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y HIST3H2AQ7L7L0 130 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y HDXQ7Z353 690 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y DPPA2Q7Z7J5 298 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y LRRC18Q8N456 261 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y LRRC17Q8N6Y2 441 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y RBM15BQ8NDT2 890 aaKnown RBP13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y HIST1H2ACQ93077 130 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y NTN4Q9HB63 628 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y NANSQ9NR45 359 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y TRIM33Q9UPN9 1127 aa13.77□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y CPSF4LA6NMK7 179 aaKnown RBP13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y TMPRSS2O15393 492 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y SNAP29O95721 258 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y PGA4P0DJD7 388 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y PGA3P0DJD8 388 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y GATA3P23771 443 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y APLNRP35414 380 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y ZNF84P51523 738 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y HSF2Q03933 536 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y FOXL1Q12952 345 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y ZNF74Q16587 644 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y PRR31Q5SQ13 230 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y SPATA46Q5T0L3 261 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y ZNF613Q6PF04 617 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y TTC33Q6PID6 262 aaPredicted RBP13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y SHISA2Q6UWI4 295 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y DHDDSQ86SQ9 333 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y C11orf65Q8NCR3 313 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y ELMOD3Q96FG2 381 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y ZNF747Q9BV97 191 aa13.76□□□□□ -0.21
CD99-211ENST00000623253_PAR_Y VIPAS39Q9H9C1 493 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms