RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 HERV-K104P61576 105 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 CNN3Q15417 329 aaKnown RBP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 MEP1BQ16820 701 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 CT45A2Q5DJT8 189 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 Q6ZPB1 254 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 DGAT2L6Q6ZPD8 337 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 NLRC3Q7RTR2 1065 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 KANSL1Q7Z3B3 1105 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 C1orf87Q8N0U7 546 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 POC5Q8NA72 575 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 OR5D18Q8NGL1 313 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 NEIL3Q8TAT5 605 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 RNF170Q96K19 258 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 UBQLN3Q9H347 655 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 AHRRA9YTQ3 701 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 HOXD4P09016 255 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 SDC2P34741 201 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 TNFSF10P50591 281 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 MTCP1P56278 107 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 EDDM3AQ14507 147 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 LIN54Q6MZP7 749 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 BATF2Q8N1L9 274 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 GPR148Q8TDV2 347 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 AKAP1Q92667 903 aaKnown RBP eCLIP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 COG8Q96MW5 612 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 SIGLEC12Q96PQ1 595 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 CST11Q9H112 138 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 PCDHGB6Q9Y5F9 930 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 DOCK7Q96N67 2140 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 ANK1P16157 1881 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 OR7C1O76099 320 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 RPL5P46777 297 aaKnown RBP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 PHC1P78364 1004 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 IL18R1Q13478 541 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 SPHARQ15513 63 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 LRRC56Q8IYG6 542 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 TMEM185AQ8NFB2 350 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 PDCD10Q9BUL8 212 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 GLRX2Q9NS18 164 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 GLTPQ9NZD2 209 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 FAM96BQ9Y3D0 163 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 TANC1Q9C0D5 1861 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 TLN1Q9Y490 2541 aaKnown RBP8.18□□□□□ -1.1
HDAC9-229ENST00000622668 NAV3Q8IVL0 2385 aa8.18□□□□□ -1.1
HDAC9-229ENST00000622668 MPPED1O15442 326 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CLDN20P56880 219 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 THEM4Q5T1C6 240 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 SH2D5Q6ZV89 423 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 SCCPDHQ8NBX0 429 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 OR13C9Q8NGT0 318 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TNFAIP8L1Q8WVP5 186 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 POTEKPQ9BYX7 375 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 OCEL1Q9H607 264 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 NKX6-3A6NJ46 265 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 PRICKLE3O43900 615 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CRTAPO75718 401 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 SLC2A10O95528 541 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ELK4P28324 431 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CDAP32320 146 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 FRKP42685 505 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 PPA1Q15181 289 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 NTRK2Q16620 822 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 HEPHL1Q6MZM0 1159 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ZAR1Q86SH2 424 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 OR4F15Q8NGB8 312 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 OR5D14Q8NGL3 314 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CCL17Q92583 94 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 RAB39BQ96DA2 213 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 UCN2Q96RP3 112 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 UBL7Q96S82 380 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 BATF3Q9NR55 127 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 RALGAPA2Q2PPJ7 1873 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ANKRD11Q6UB99 2663 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CD8B2A6NJW9 211 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF99A8MXY4 864 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 M0R135 149 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 HSPB6O14558 160 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 PATE4P0C8F1 98 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CD8BP10966 210 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 FPR3P25089 353 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TEKQ02763 1124 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CTU2Q2VPK5 515 aaKnown RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 MEPCEQ7L2J0 689 aaKnown RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 BHLHA15Q7RTS1 189 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TMEM17Q86X19 198 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 SNX29P2Q8IUI4 249 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 GTPBP8Q8N3Z3 284 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TRUB1Q8WWH5 349 aaKnown RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 IL1F10Q8WWZ1 152 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF799Q96GE5 643 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 BARD1Q99728 777 aaKnown RBP8.17□□□□□ -1.1
HDAC9-229ENST00000622668 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ABCB10Q9NRK6 738 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 FITM1A5D6W6 292 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 TBX19O60806 448 aa8.17□□□□□ -1.1
HDAC9-229ENST00000622668 ZG16O60844 167 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms