RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ADAM18Q9Y3Q7 739 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 MMP24Q9Y5R2 645 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 MYO10Q9HD67 2058 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 DUXAA6NLW8 204 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 TGOLN2O43493 480 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 GLCEO94923 617 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 CSF1P09603 554 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 FAM157CP0CG43 387 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 ZNF7P17097 686 aaPredicted RBP7.23□□□□□ -1.25
VPS11-209ENST00000622309 TDGF1P3P51864 188 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 LSM11P83369 360 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS11-209ENST00000622309 CHIT1Q13231 466 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 TRA2AQ13595 282 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS11-209ENST00000622309 TCEA2Q15560 299 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 ZNF750Q32MQ0 723 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 GGTA1PQ4G0N0 100 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 DCAF10Q5QP82 559 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 ZNF585AQ6P3V2 769 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 LCTLQ6UWM7 567 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 CPOQ8IVL8 374 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 DEFB123Q8N688 67 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 HSD17B11Q8NBQ5 300 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 C17orf47Q8NEP4 570 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 GPR32P1Q8NGA4 272 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 OR14K1Q8NGZ2 314 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 DCUN1D4Q92564 292 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 EDAQ92838 391 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 FKRPQ9H9S5 495 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 FOXJ3Q9UPW0 622 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 MRPS18CQ9Y3D5 142 aaKnown RBP7.23□□□□□ -1.25
VPS11-209ENST00000622309 POMT1Q9Y6A1 747 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 CCDC88CQ9P219 2028 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 A0A1W2PN81 502 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 C17orf102A2RUQ5 167 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 SFTPBP07988 381 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 RAB40ALP0C0E4 278 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 CDK2P24941 298 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 PYCR1P32322 319 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 CHRNA7P36544 502 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 PNPLA4P41247 253 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 PMP22Q01453 160 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 RAB41Q5JT25 222 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 OR2T2Q6IF00 324 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 TNFAIP8L2Q6P589 184 aaPredicted RBP7.23□□□□□ -1.25
VPS11-209ENST00000622309 FAM199XQ6PEV8 388 aaPredicted RBP7.23□□□□□ -1.25
VPS11-209ENST00000622309 RPTNQ6XPR3 784 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 SCN4BQ8IWT1 228 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 TMEM99Q8N816 258 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 PNLDC1Q8NA58 520 aaKnown RBP7.23□□□□□ -1.25
VPS11-209ENST00000622309 M1APQ8TC57 530 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 C16orf78Q8WTQ4 265 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 RAB40AQ8WXH6 277 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 GALNT14Q96FL9 552 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 PCED1BQ96HM7 432 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 TRIB3Q96RU7 358 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 BHLHE41Q9C0J9 482 aaPredicted RBP7.23□□□□□ -1.25
VPS11-209ENST00000622309 RAB33BQ9H082 229 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 PARD6AQ9NPB6 346 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 NRIP3Q9NQ35 241 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS11-209ENST00000622309 PRODH2Q9UF12 536 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 SCML2Q9UQR0 700 aa7.23□□□□□ -1.25
VPS11-209ENST00000622309 CCDC187A0A096LP49 1063 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 XKRY2A2RUG3 117 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3BA6NDS4 549 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 F8VVB4 439 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 F8VWA3 439 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 GPR39O43194 453 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 KCNAB3O43448 404 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TCF21O43680 179 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3HP0C7X1 549 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 AKAIN1P0CW23 69 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 EPORP19235 508 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 RAB6AP20340 208 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 PPP2R1BP30154 601 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GJA4P35212 333 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 CLDN12P56749 244 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TAS2R20P59543 309 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 FZD5Q13467 585 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GPNMBQ14956 572 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 UBE2V2Q15819 145 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ARSJQ5FYB0 599 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 TBC1D3GQ6DHY5 549 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 MRM1Q6IN84 353 aaKnown RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 TRAT1Q6PIZ9 186 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 OVCH1Q7RTY7 1134 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 LRRC70Q7Z2Q7 622 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ANKRD33Q7Z3H0 272 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 UMODL1-AS1Q8N2C9 162 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ZBTB2Q8N680 514 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TEX26Q8N6G2 289 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 OR8S1Q8NH09 359 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ZCCHC10Q8TBK6 192 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 NANOS1Q8WY41 292 aaKnown RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 MR1Q95460 341 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 C4orf36Q96KX1 117 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 MRGPRX4Q96LA9 322 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 WDR92Q96MX6 357 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ZNF558Q96NG5 402 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms