RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PSG5Q15238 335 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 GUCA2BQ16661 112 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 TMEM179Q6ZVK1 233 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 SSX9Q7RTT3 188 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 CAMK2N1Q7Z7J9 78 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 GABRG1Q8N1C3 465 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 BBOF1Q8ND07 529 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 CCDC54Q8NEL0 328 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 ZNF502Q8TBZ5 544 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 AGR3Q8TD06 166 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 C8orf44Q96CB5 159 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 GABARAPL3Q9BY60 117 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 DNTTIP1Q9H147 329 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 RPF2Q9H7B2 306 aaKnown RBP3.3□□□□□ -1.88
CPNE3-213ENST00000622183 DDX18Q9NVP1 670 aaKnown RBP3.3□□□□□ -1.88
CPNE3-213ENST00000622183 ZNF226Q9NYT6 803 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 CELA1Q9UNI1 258 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 HEBP2Q9Y5Z4 205 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 F11RQ9Y624 299 aaKnown RBP3.3□□□□□ -1.88
CPNE3-213ENST00000622183 ADAMTS9Q9P2N4 1935 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 AKNAQ7Z591 1439 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 CEMIPQ8WUJ3 1361 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 A0A1B0GUA9 196 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 F6UB75 175 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 SERPINA5P05154 406 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 PNMA6AP0CW24 399 aaPredicted RBP3.29□□□□□ -1.88
CPNE3-213ENST00000622183 MYL2P10916 166 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 CNR1P21554 472 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 STOMP27105 288 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 AK4P27144 223 aaPredicted RBP3.29□□□□□ -1.88
CPNE3-213ENST00000622183 DCKP27707 260 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 GTF2E2P29084 291 aaKnown RBP3.29□□□□□ -1.88
CPNE3-213ENST00000622183 CKAP4Q07065 602 aaKnown RBP3.29□□□□□ -1.88
CPNE3-213ENST00000622183 MPPED2Q15777 294 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 HSDL1Q3SXM5 330 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 C2orf83Q53S99 150 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 TMEM255AQ5JRV8 349 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 SOHLH1Q5JUK2 328 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 TMEM53Q6P2H8 277 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 CLEC2AQ6UVW9 174 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 RNF175Q8N4F7 328 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 COMMD1Q8N668 190 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 PQLC3Q8N755 202 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 DUS3LQ96G46 650 aaKnown RBP3.29□□□□□ -1.88
CPNE3-213ENST00000622183 TSSK3Q96PN8 268 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 GSDMAQ96QA5 445 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 SLCO1B3Q9NPD5 702 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 SAMSN1Q9NSI8 373 aaKnown RBP3.29□□□□□ -1.88
CPNE3-213ENST00000622183 C20orf96Q9NUD7 363 aaPredicted RBP3.29□□□□□ -1.88
CPNE3-213ENST00000622183 PCYOX1Q9UHG3 505 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 MEGF6O75095 1541 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 CHD4Q14839 1912 aa3.29□□□□□ -1.88
CPNE3-213ENST00000622183 TTC41PQ6P2S7 1318 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 ZNF816-ZNF321PA0A0X1KG74 233 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 WI2-2373I1.2A0A1W2PRP0 233 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 PINLYPA6NC86 204 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 NKX2-6A6NCS4 301 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 A6NDX4 124 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 HIDE1A8MVS5 230 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 H0Y9J4 135 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 CASC3O15234 703 aaKnown RBP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 UTS2O95399 124 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 AIFM1O95831 613 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 BGLAPP02818 100 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 ZDHHC11BP0C7U3 371 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 CALM1P0DP23 149 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 CALM2P0DP24 149 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 CALM3P0DP25 149 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 NR2C1P13056 603 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 CCNB1P14635 433 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 ZNF250P15622 560 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 NAMPTP43490 491 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 NMUP48645 174 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 MRPL19P49406 292 aaKnown RBP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 NCBP2P52298 156 aaKnown RBP eCLIP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 NUTF2P61970 127 aaKnown RBP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 PAX5Q02548 391 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 SMARCB1Q12824 385 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 SF3A2Q15428 464 aaKnown RBP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 KRT71Q3SY84 523 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 C6orf120Q7Z4R8 191 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 ZNF429Q86V71 674 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 MMAAQ8IVH4 418 aaKnown RBP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 CMTM1Q8IZ96 169 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 Q8N9W7 124 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 BPIFCQ8NFQ6 507 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 OR51G1Q8NGK1 321 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 OR5B3Q8NH48 314 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 ASB9Q96DX5 294 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 RNF185Q96GF1 192 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 FAM210BQ96KR6 192 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 DMAP1Q9NPF5 467 aaPredicted RBP3.28□□□□□ -1.88
CPNE3-213ENST00000622183 PTTG3PQ9NZH4 202 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 MTCH1Q9NZJ7 389 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 NYAP2Q9P242 653 aa3.28□□□□□ -1.88
CPNE3-213ENST00000622183 DEC1Q9P2X7 70 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms