RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-215	ENST00000621534	OR2M2	Q96R28	347 aa		13.43	□□□□□ -0.26
PSMD13-215	ENST00000621534	PRDM14	Q9GZV8	571 aa		13.43	□□□□□ -0.26
PSMD13-215	ENST00000621534	FKBP7	Q9Y680	259 aa		13.43	□□□□□ -0.26
PSMD13-215	ENST00000621534	SPTAN1	Q13813	2472 aa	Known RBP	13.43	□□□□□ -0.26
PSMD13-215	ENST00000621534		A0A1B0GTH9	108 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	TVP23A	A6NH52	213 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534		A6NHS1	94 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	ZNF432	O94892	652 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	SYNGR4	O95473	234 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	IGHG1	P01857	330 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	SBK2	P0C263	348 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	LIMS3	P0CW19	117 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	LIMS4	P0CW20	117 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	PSKH1	P11801	424 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	DCK	P27707	260 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	ATP6V1E1	P36543	226 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	GP2	P55259	537 aa	Known RBP	13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	RASGEF1B	Q0VAM2	473 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	OTP	Q5XKR4	325 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	FGD2	Q7Z6J4	655 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	TMEM123	Q8N131	208 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	RFLNB	Q8N5W9	214 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	ADAD1	Q96M93	576 aa	Known RBP	13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	CNN2	Q99439	309 aa	Known RBP	13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	TBX5	Q99593	518 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	ZNF649	Q9BS31	505 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	VCX3A	Q9NNX9	186 aa		13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	MCTS1	Q9ULC4	181 aa	Known RBP	13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	LSM2	Q9Y333	95 aa	Known RBP	13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	SPTBN1	Q01082	2364 aa	Known RBP	13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD13-215	ENST00000621534	SELENOP	P49908	381 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	HCCS	P53701	268 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	CLRN1	P58418	232 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	POU4F2	Q12837	409 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	RAB39A	Q14964	217 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	PHYHD1	Q5SRE7	291 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	UBE2U	Q5VVX9	321 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	RNLS	Q5VYX0	342 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	HDDC2	Q7Z4H3	204 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	OR5M11	Q96RB7	305 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	JAM3	Q9BX67	310 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	RACGAP1	Q9H0H5	632 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	MOK	Q9UQ07	419 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	IGKV3D-15	A0A087WSY6	115 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	ZNF726	A6NNF4	738 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	C12orf71	A8MTZ7	269 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	AHCYL1	O43865	530 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	CRYAB	P02511	175 aa	Known RBP	13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	MYL12A	P19105	171 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	CRABP1	P29762	137 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	HIST3H3	Q16695	136 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	FOXB2	Q5VYV0	432 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	LHFPL3	Q86UP9	236 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	TIGD4	Q8IY51	512 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	POMGNT2	Q8NAT1	580 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	OR10H4	Q8NGA5	316 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	NSMAF	Q92636	917 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	WDR76	Q9H967	626 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	MARCH7	Q9H992	704 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	BATF3	Q9NR55	127 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	ERVK13-1	Q9NX77	482 aa		13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	COA3	Q9Y2R0	106 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.41	□□□□□ -0.26
PSMD13-215	ENST00000621534	ICE1	Q9Y2F5	2266 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	SVIL	O95425	2214 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	UTP20	O75691	2785 aa	Known RBP	13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	TTLL8	A6PVC2	850 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	ZNF99	A8MXY4	864 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	TGM6	O95932	706 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	PSMB9	P28065	219 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	PTGS2	P35354	604 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	UQCRFS1	P47985	274 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	CENPA	P49450	140 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	ZNF85	Q03923	595 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	OR2G6	Q5TZ20	316 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	FAM180A	Q6UWF9	173 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	CHMP1B	Q7LBR1	199 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	SSX6	Q7RTT6	188 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	ADGRE4P	Q86SQ3	457 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	ERI1	Q8IV48	349 aa	Known RBP	13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	SLC35F2	Q8IXU6	374 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	ACBD7	Q8N6N7	88 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	NANOGP1	Q8N7R0	232 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	OR5M9	Q8NGP3	310 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	OR13F1	Q8NGS4	319 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	RORB	Q92753	470 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	TMEM54	Q969K7	222 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	SARAF	Q96BY9	339 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	GPR137	Q96N19	417 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	MND1	Q9BWT6	205 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	MRPL22	Q9NWU5	206 aa	Known RBP	13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	CLCF1	Q9UBD9	225 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	CLEC4A	Q9UMR7	237 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	COPS3	Q9UNS2	423 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534	RCE1	Q9Y256	329 aa		13.4	□□□□□ -0.26
PSMD13-215	ENST00000621534		A0A1W2PQL4	384 aa	Predicted RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms