RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 EDN3P14138 238 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 KIAA1024LP59773 190 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 VASNQ6EMK4 673 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 Q6ZTK2 550 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 UBE3DQ7Z6J8 389 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 PQLC3Q8N755 202 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 PINX1Q96BK5 328 aaKnown RBP6.64□□□□□ -1.35
COLCA1-205ENST00000620864 SMIM12Q96EX1 92 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 NTMT1Q9BV86 223 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 PDLIM7Q9NR12 457 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 URGCP-MRPS24S4R325 110 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 DUOX1Q9NRD9 1551 aa6.64□□□□□ -1.35
COLCA1-205ENST00000620864 FAM171A2A8MVW0 826 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SPINT2O43291 252 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 AQP8O94778 261 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ARNTP27540 789 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PSMB6P28072 239 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 HOXD13P35453 343 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 NKX2-1P43699 371 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PTRH1Q86Y79 214 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OR6S1Q8NH40 331 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 LGALS14Q8TCE9 139 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 DCTN6O00399 190 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 TFAP2AP05549 437 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 TIMP2P16035 220 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 DHODHQ02127 395 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SCAMP5Q8TAC9 235 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 IL1F10Q8WWZ1 152 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 EDAQ92838 391 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 KHSRPQ92945 711 aaKnown RBP eCLIP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 LPAR4Q99677 370 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ELOVL1Q9BW60 279 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 NOX4Q9NPH5 578 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CLCF1Q9UBD9 225 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PISDQ9UG56 409 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 B3GALT5Q9Y2C3 310 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 IDSB3KWA1 339 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PHF1O43189 567 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 AIFM1O95831 613 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 GGT5P36269 586 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SIGIRRQ6IA17 410 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 FA2HQ7L5A8 372 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 KLHDC8AQ8IYD2 350 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 NUDT22Q9BRQ3 303 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 WDR61Q9GZS3 305 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PSAT1Q9Y617 370 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 LOC102723971A0A1B0GUV8 181 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 POM121BA6NF01 834 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 NPIPB15A6NHN6 443 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OR6C76A6NM76 312 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PHOX2AO14813 284 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SIX6O95475 246 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 IGHEP01854 428 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 F2RP25116 425 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 LMO2P25791 158 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 MEOX2P50222 304 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 FABP9Q0Z7S8 132 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CDONQ4KMG0 1287 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 EIF4E3Q8N5X7 224 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 GATSQ8NAP1 163 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OR2AE1Q8NHA4 323 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PHYHIPLQ96FC7 376 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SMIM7Q9BQ49 75 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OLAHQ9NV23 265 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 DCAF16Q9NXF7 216 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 COL16A1Q07092 1604 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SLX4Q8IY92 1834 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 TRGV8A0A0C4DH27 118 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SLC9B1P1A6NJY1 282 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 F5H5K5 113 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 MKRN2OSH3BPM6 223 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CTDSP2O14595 271 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 TPOP07202 933 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CD37P11049 281 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF28P17035 718 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 GPX3P22352 226 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 GABRA4P48169 554 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF534Q76KX8 674 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 LRRTM1Q86UE6 522 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ZC3H3Q8IXZ2 948 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 HSD17B11Q8NBQ5 300 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SDR9C7Q8NEX9 313 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OR4D10Q8NGI6 311 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OR4F5Q8NH21 305 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 RPL3LQ92901 407 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OR4F4Q96R69 305 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 MACROD1Q9BQ69 325 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 HEYLQ9NQ87 328 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 MTCH1Q9NZJ7 389 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 GDF2Q9UK05 429 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 RPH3ALQ9UNE2 315 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CSNK1G3Q9Y6M4 447 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PLCH1Q4KWH8 1693 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 OMGP23515 440 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 DSC1Q08554 894 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 AANATQ16613 207 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SYPL2Q5VXT5 272 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF626Q68DY1 528 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SUSD1Q6UWL2 747 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms