RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GUSBP1Q15486 140 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 SPHARQ15513 63 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ARMC4Q5T2S8 1044 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 HACD4Q5VWC8 232 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 WBP2NLQ6ICG8 309 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 C3orf33Q6P1S2 294 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 BEND4Q6ZU67 534 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FAM214BQ7L5A3 538 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF550Q7Z398 422 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 GRINAQ7Z429 371 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CCDC190Q86UF4 302 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 AKAP14Q86UN6 197 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 LYSMD2Q8IV50 215 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CADM3Q8N126 398 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CADM2Q8N3J6 435 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 NANOGP1Q8N7R0 232 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 LSMEM1Q8N8F7 131 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 POC5Q8NA72 575 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 OR6K3Q8NGY3 331 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 OR10D3Q8NH80 312 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 FNDC9Q8TBE3 224 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 APH1BQ8WW43 257 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ACOT12Q8WYK0 555 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ROBO4Q8WZ75 1007 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 OSTF1Q92882 214 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 TRIM63Q969Q1 353 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 KLHL15Q96M94 604 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 TRIB1Q96RU8 372 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 MCHR1Q99705 422 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 PRSS27Q9BQR3 290 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF559Q9BR84 538 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 PTDSS2Q9BVG9 487 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CDADC1Q9BWV3 514 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 POLDIP3Q9BY77 421 aaKnown RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 NMNAT1Q9HAN9 279 aaPredicted RBP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 C12orf10Q9HB07 376 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 DIABLOQ9NR28 239 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 PLSCR4Q9NRQ2 329 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 RASSF1Q9NS23 344 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 MAN2C1Q9NTJ4 1040 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF226Q9NYT6 803 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 CHRNA9Q9UGM1 479 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ADAM30Q9UKF2 790 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.67□□□□□ -1.66
SHMT1-211ENST00000618902 A4GNTQ9UNA3 340 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 HDGFL3Q9Y3E1 203 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 ARID1AO14497 2285 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 NF1P21359 2839 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 HCFC1P51610 2035 aa4.67□□□□□ -1.66
SHMT1-211ENST00000618902 PLCE1Q9P212 2302 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 A0A087WUJ7 227 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TMEM129A0AVI4 362 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 A1L4Q6 167 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 HTR3EA5X5Y0 456 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TUBAL3A6NHL2 446 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 LIPT2A6NK58 231 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 CPSF4LA6NMK7 179 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 FAM25AB3EWG3 89 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 FAM25CB3EWG5 89 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 FAM25GB3EWG6 89 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 LRRN3E7EW58 273 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF670-ZNF695F2Z2N8 137 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 C19orf84I3L1E1 186 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GPR171O14626 319 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 RGS13O14921 159 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 SMAD9O15198 467 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF208O43345 1280 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 FMO6PO60774 539 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 SS18L1O75177 396 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TNFSF13O75888 250 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 DIRAS1O95057 198 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 VAMP5O95183 116 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 SYNGR4O95473 234 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GASTP01350 101 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 BGLAPP02818 100 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MYL12AP19105 171 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 BMP5P22003 454 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GRNP28799 593 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 C21orf33P30042 268 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 NTF4P34130 210 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 KIR2DL2P43627 348 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MAP2K4P45985 399 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GIPRP48546 466 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 GSSP48637 474 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 DIO1P49895 249 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 P2RY4P51582 365 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 POLR2HP52434 150 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 AGFG1P52594 562 aaKnown RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 CARD18P57730 90 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 H3F3AP84243 136 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 BDH1Q02338 343 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 PIN1Q13526 163 aaPredicted RBP4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TPBGQ13641 420 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 MFSD13AQ14CX5 517 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 P2RY6Q15077 328 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 PON3Q15166 354 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TRAM1Q15629 374 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 TAB1Q15750 504 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 SGCBQ16585 318 aa4.66□□□□□ -1.66
SHMT1-211ENST00000618902 ZNF239Q16600 458 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms