RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 FAM3DQ96BQ1 224 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 TPRG1Q6ZUI0 275 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 NAXDQ8IW45 347 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 OR2AE1Q8NHA4 323 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 ATF6BQ99941 703 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 ELOVL3Q9HB03 270 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 NAT8BQ9UHF3 227 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 MYO5AQ9Y4I1 1855 aaKnown RBP13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ADGRB1O14514 1584 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PAPLNO95428 1278 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 RAD52P43351 418 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 SLC35A1P78382 337 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 GRM7Q14831 915 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 OR7A5Q15622 319 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ZNF566Q969W8 418 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 KAZALD1Q96I82 304 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PCYT2Q99447 389 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 GPR45Q9Y5Y3 372 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 HTR1FP30939 366 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ZNF85Q03923 595 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ANKRD16Q6P6B7 361 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 SELENOIQ9C0D9 397 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 OR52D1Q9H346 318 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PLEK2Q9NYT0 353 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PITPNC1Q9UKF7 332 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 DIMT1Q9UNQ2 313 aaKnown RBP13.92□□□□□ -0.18
COL5A1-208ENST00000618395 SLC35A3Q9Y2D2 325 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 B4E171 279 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 RHBDL1O75783 438 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 OR2J3O76001 311 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 HAPLN1P10915 354 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-208ENST00000618395 SP2Q02086 613 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 SOWAHAQ2M3V2 549 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 MKXQ8IYA7 352 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 MAP1LC3CQ9BXW4 147 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 TMEM269A0A1B0GVZ9 245 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 RTCAO00442 366 aaKnown RBP13.92□□□□□ -0.18
COL5A1-208ENST00000618395 SLC22A24Q8N4F4 322 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 WDR89Q96FK6 387 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-208ENST00000618395 NOSIPQ9Y314 301 aaKnown RBP13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PTPRUQ92729 1446 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 MCRIP1C9JLW8 97 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 COMMD6Q7Z4G1 85 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ZNF100Q8IYN0 542 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PNPLA1Q8N8W4 532 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 OR5M11Q96RB7 305 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 OR51M1Q9H341 326 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PDZD7Q9H5P4 517 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 CORINQ9Y5Q5 1042 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 LRP3O75074 770 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 LMO2P25791 158 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 GPM6AP51674 278 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ATP1B3P54709 279 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PLCXD2Q0VAA5 305 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 HLA-BQ31612 363 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 OIT3Q8WWZ8 545 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 HDAC8Q9BY41 377 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 DIP2AQ14689 1571 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PEX12O00623 359 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 SYN3O14994 580 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 BLVRBP30043 206 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-208ENST00000618395 ZXDBP98169 803 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 PPTC7Q8NI37 304 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 LINC00597Q9H2U6 94 aa13.92□□□□□ -0.18
COL5A1-208ENST00000618395 GASTP01350 101 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 PRAMEF19Q5SWL8 479 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 OR2AK2Q8NG84 335 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 OR5K2Q8NHB8 316 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 ZNF384Q8TF68 577 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 NMES1Q9C002 83 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 OR6C3Q9NZP0 311 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 SOX21Q9Y651 276 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-208ENST00000618395 TNFP01375 233 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 ZNF28P17035 718 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 ENPP1P22413 925 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 CGB2Q6NT52 195 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 LETMD1Q6P1Q0 360 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 RBM24Q9BX46 236 aaKnown RBP13.91□□□□□ -0.18
COL5A1-208ENST00000618395 A0A0B4J203 849 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 ANKRD30BLA7E2S9 258 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 UGDHO60701 494 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 F2P00734 622 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 FABP2P12104 132 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 OR3A1P47881 315 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 SLC6A8P48029 635 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 LILRA2Q8N149 483 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 SLC35G3Q8N808 338 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 ARHGAP23Q9P227 1491 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 FCN1O00602 326 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 MAN2B1O00754 1011 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 PPM1DO15297 605 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 CALCBP10092 127 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 FUT1P19526 365 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 KIAA0319Q5VV43 1072 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 DAZLQ92904 295 aaKnown RBP13.91□□□□□ -0.18
COL5A1-208ENST00000618395 FKBP11Q9NYL4 201 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 MYBPHLA2RUH7 354 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 CRHP06850 196 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms