RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 RNF113BQ8IZP6 322 aaKnown RBP9.9□□□□□ -0.82
POLR2A-209ENST00000617998 GPR148Q8TDV2 347 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 TREX2Q9BQ50 279 aaPredicted RBP9.9□□□□□ -0.82
POLR2A-209ENST00000617998 A0A087WV62 115 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 SDHDO14521 159 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 PRKACAP17612 351 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 B4GALNT1Q00973 533 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 GPR50Q13585 617 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 SEMA6DQ8NFY4 1073 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 DYNLRB2Q8TF09 96 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 DIRC2Q96SL1 478 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 S1PR3Q99500 378 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 TMEM59Q9BXS4 323 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 OR52D1Q9H346 318 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 HEXA-AS1Q9H8Q6 139 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 GSKIPQ9P0R6 139 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 PIGLQ9Y2B2 252 aa9.9□□□□□ -0.82
POLR2A-209ENST00000617998 AMMECR1Q9Y4X0 333 aaPredicted RBP9.9□□□□□ -0.82
POLR2A-209ENST00000617998 TSPAN4O14817 238 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 DHHO43323 396 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 XRCC2O43543 280 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 RPS16P62249 146 aaKnown RBP9.9□□□□□ -0.83
POLR2A-209ENST00000617998 UBE2IP63279 158 aaKnown RBP9.9□□□□□ -0.83
POLR2A-209ENST00000617998 GAB4Q2WGN9 574 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 SPATS1Q496A3 300 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 CD276Q5ZPR3 534 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 ZNF613Q6PF04 617 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 OGFOD3Q6PK18 319 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 EGLN2Q96KS0 407 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 BIRC8Q96P09 236 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 OPN3Q9H1Y3 402 aaPredicted RBP9.9□□□□□ -0.83
POLR2A-209ENST00000617998 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.9□□□□□ -0.83
POLR2A-209ENST00000617998 CLN8Q9UBY8 286 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 H7C417 338 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 TGFAP01135 160 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 Q6ZTK2 550 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 OLIG1Q8TAK6 271 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 DDX31Q9H8H2 851 aaKnown RBP9.9□□□□□ -0.83
POLR2A-209ENST00000617998 EMC7Q9NPA0 242 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 SLAMF8Q9P0V8 285 aa9.9□□□□□ -0.83
POLR2A-209ENST00000617998 IST1P53990 364 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 RPL27P61353 136 aaKnown RBP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 USP51Q70EK9 711 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 OR13C2Q8NGS9 318 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 MRPS24Q96EL2 167 aaKnown RBP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 SLC6A7Q99884 636 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CD320Q9NPF0 282 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 HINT3Q9NQE9 182 aaKnown RBP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 GPR52Q9Y2T5 361 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 FZD6O60353 706 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CD8BP10966 210 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CD97P48960 835 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CDNFQ49AH0 187 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 ZNF322Q6U7Q0 402 aaPredicted RBP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CEACAM19Q7Z692 300 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 TMED4Q7Z7H5 227 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 SNX29P2Q8IUI4 249 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CPOQ8IVL8 374 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CNTN4Q8IWV2 1026 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 OR5H2Q8NGV7 314 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 OCSTAMPQ9BR26 566 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 PPP1R3CQ9UQK1 317 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 ALG1L2C9J202 215 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 E7ESA3 106 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 CELP19835 753 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 ADH6P28332 368 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 XKR7Q5GH72 579 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 NXNL2Q5VZ03 156 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 ATOH8Q96SQ7 321 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 GNMTQ14749 295 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 LRRC17Q8N6Y2 441 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 OR7G2Q8NG99 324 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 FAM168AQ92567 244 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 TOMM40LQ969M1 308 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 SFXN3Q9BWM7 321 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 HS3ST1O14792 307 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 PRKACGP22612 351 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 RPL34P49207 117 aaKnown RBP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 PRRX1P54821 245 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 NRN1LQ496H8 165 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 COMTD1Q86VU5 262 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 OR8J1Q8NGP2 316 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 APOBEC3DQ96AK3 386 aaPredicted RBP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 ALG14Q96F25 216 aa9.89□□□□□ -0.83
POLR2A-209ENST00000617998 EXO1Q9UQ84 846 aaKnown RBP9.89□□□□□ -0.83
POLR2A-209ENST00000617998 A0A1W2PR77 199 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 CX3CR1P49238 355 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 SELENOWP63302 87 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 FCGR1BQ92637 280 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 PTDSS2Q9BVG9 487 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 QSER1Q2KHR3 1735 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 CEBPZOSA8MTT3 80 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 P2RX6O15547 441 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 GYPBP06028 91 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 UBE2UQ5VVX9 321 aa9.88□□□□□ -0.83
POLR2A-209ENST00000617998 ARMC1Q9NVT9 282 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms