RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 FGF20Q9NP95 211 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 TGOLN2O43493 480 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 THBS3P49746 956 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 TESK1Q15569 626 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 CCSMST1Q4G0I0 132 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 NPSR1Q6W5P4 371 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 ANGPTL5Q86XS5 388 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 CGGBP1Q9UFW8 167 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 PRSS38A1L453 326 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 IFITM5A6NNB3 132 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF724A8MTY0 619 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 HMGN4O00479 90 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 RAB11AP62491 216 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 MFAP5Q13361 173 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 RNLSQ5VYX0 342 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 OR5M10Q6IEU7 315 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 FAM199XQ6PEV8 388 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 Q6ZSR6 202 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 GLCCI1Q86VQ1 547 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 PTOV1Q86YD1 416 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 CLSTN3Q9BQT9 956 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 PARP12Q9H0J9 701 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 TMEM231Q9H6L2 316 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 POMT2Q9UKY4 750 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 SRPK3Q9UPE1 567 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 ASB1Q9Y576 335 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 CDC14CA4D256 554 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 ZFP92A6NM28 416 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 B3GALT4O96024 378 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 HLA-DOBP13765 273 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 CPN1P15169 458 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 ZP3P21754 424 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 EEF1A1P68104 462 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 SRYQ05066 204 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 TAF9Q16594 264 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 HSF5Q4G112 596 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 GLIPR1L1Q6UWM5 242 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 OR1S2Q8NGQ3 325 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 SEH1LQ96EE3 360 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC6A18Q96N87 628 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 SEMA4CQ9C0C4 833 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 STRADBQ9C0K7 418 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 ZCCHC4Q9H5U6 513 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 FN3KRPQ9HA64 309 aa9.81□□□□□ -0.84
CLTCL1-209ENST00000617103 OPN1LWP04000 364 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 CSNK1G2P78368 415 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 TMEM31Q5JXX7 168 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 Q6ZRG5 221 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 DPPA2Q7Z7J5 298 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 BPHLQ86WA6 291 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 MFSD4AQ8N468 514 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 PFN4Q8NHR9 129 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 LRFN5Q96NI6 719 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 NKX3-1Q99801 234 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ABHD6Q9BV23 337 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ARV1Q9H2C2 271 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF385DQ9H6B1 395 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC23A1Q9UHI7 598 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 KLKB1P03952 638 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 CYBAP13498 195 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 NID1P14543 1247 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF684Q5T5D7 378 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 TAS1R1Q7RTX1 841 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 SKA3Q8IX90 412 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC39A11Q8N1S5 342 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 SMIM4Q8WVI0 70 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC46A1Q96NT5 459 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 PRAMEF26H0Y7S4 382 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 H7BYZ3 331 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 DCTN6O00399 190 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 CLDN1O95832 211 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ACSM4P0C7M7 580 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 AADACP22760 399 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC6A12P48065 614 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 EMP3P54852 163 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 OR10A3P58181 314 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ERV3-1Q14264 604 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF750Q32MQ0 723 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 PRSS36Q5K4E3 855 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 LINC00346Q8IVM7 164 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 SMIM19Q96E16 107 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 HCFC1R1Q9NWW0 138 aa9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 TMEFF2Q9UIK5 374 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-209ENST00000617103 ZC3H12DA2A288 527 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 GFYI3L273 518 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 NME2P1O60361 137 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 DOK2O60496 412 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC35E2P0CK97 266 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 ACHEP22303 614 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 FOXK1P85037 733 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 RAB30Q15771 203 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 FJX1Q86VR8 437 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 TMEFF1Q8IYR6 380 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 LILRA3Q8N6C8 439 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 C15orf54Q8N8G6 183 aa9.79□□□□□ -0.84
CLTCL1-209ENST00000617103 OR5L1Q8NGL2 311 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms