RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 C19orf43Q9BQ61 176 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 DOT1LQ8TEK3 1739 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 C5P01031 1676 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 NSA2O95478 260 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 ABHD16AO95870 558 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 MAVSQ7Z434 540 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 FJX1Q86VR8 437 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 OLIG1Q8TAK6 271 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 TMEM255BQ8WV15 326 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 SLC7A6Q92536 515 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 PLEKHF2Q9H8W4 249 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 VAMP5O95183 116 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 OMGP23515 440 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 LCN6P62502 163 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 LRRC26Q2I0M4 334 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 C1orf140Q5VVS0 124 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 RBMXL3Q8N7X1 1067 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 SECTM1Q8WVN6 248 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 ASB13Q8WXK3 278 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 SEC22CQ9BRL7 303 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 ZBP1Q9H171 429 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 PISDQ9UG56 409 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 CDC14CA4D256 554 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 PTGER1P34995 402 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 TRIM23P36406 574 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 MEP1BQ16820 701 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 KANSL1Q7Z3B3 1105 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 MS4A4AQ96JQ5 239 aa16.03■□□□□ 0.16
HMGXB3-206ENST00000613459 A0A1B0GTW7 788 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 OR6C76A6NM76 312 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 KLRC4-KLRK1H3BQV0 150 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 MT-ND4LP03901 98 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 OR6K3Q8NGY3 331 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 OR51B6Q9H340 312 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 BCO1Q9HAY6 547 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 HRASLSQ9HDD0 168 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 KCND3Q9UK17 655 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 NDRG4Q9ULP0 352 aaKnown RBP16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 P2RY10O00398 339 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 PRAMEF4O60810 478 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 CLDN1O95832 211 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 NPPBP16860 134 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 HCCSP53701 268 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 RPL27P61353 136 aaKnown RBP16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 ACVR1Q04771 509 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 ERV3-1Q14264 604 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 IAH1Q2TAA2 248 aaPredicted RBP16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 AFMIDQ63HM1 303 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 SLC35B4Q969S0 331 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 TAF9BQ9HBM6 251 aa16.02■□□□□ 0.16
HMGXB3-206ENST00000613459 ARRDC5A6NEK1 342 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 K7EQM0 130 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 LGI1O95970 557 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 LIPAP38571 399 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 MAT1AQ00266 395 aaKnown RBP16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 TMEM71Q6P5X7 295 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 PRICKLE2Q7Z3G6 844 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 FAM26EQ8N5C1 309 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 SLC25A32Q9H2D1 315 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 SULT1C4O75897 302 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 ABLIM3O94929 683 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 PMP2P02689 132 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 MGST1P10620 155 aaKnown RBP16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 ARHGAP11BQ3KRB8 267 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 C10orf90Q96M02 699 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 NIPSNAP1Q9BPW8 284 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 GABARAPL3Q9BY60 117 aa16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 EXO1Q9UQ84 846 aaKnown RBP16.02■□□□□ 0.15
HMGXB3-206ENST00000613459 TUSC2O75896 110 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 APOA2P02652 100 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 BCL6P41182 706 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 CATSPERDQ86XM0 798 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 NUDT9Q9BW91 350 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 VEGFBP49765 207 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 SNTB1Q13884 538 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 TBC1D28Q2M2D7 210 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 TMEM31Q5JXX7 168 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 COX20Q5RI15 118 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 TIGD3Q6B0B8 471 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 A0A1B0GX78 115 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 MAGEB4O15481 346 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 SOD1P00441 154 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 EIF4EP06730 217 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 ELAVL1Q15717 326 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 FUNDC1Q8IVP5 155 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 INTS12Q96CB8 462 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 ZNF845Q96IR2 970 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 C19orf53Q9UNZ5 99 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 UBR2Q8IWV8 1755 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 A0A087WZY1 265 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 PHF1O43189 567 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 HOXC11O43248 304 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 P2RX1P51575 399 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 TLE1Q04724 770 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 SMIM14Q96QK8 99 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 CDCA4Q9BXL8 241 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 SLC6A17Q9H1V8 727 aa16.01■□□□□ 0.15
HMGXB3-206ENST00000613459 LRRC30A6NM36 301 aa16■□□□□ 0.15
HMGXB3-206ENST00000613459 GJB3O75712 270 aa16■□□□□ 0.15
HMGXB3-206ENST00000613459 OR2F2O95006 317 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms