RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SOX6P35712 828 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 RBM34P42696 430 aaKnown RBP7.87□□□□□ -1.15
SMAD4-217ENST00000611848 CDH11P55287 796 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 CSNK2A1P68400 391 aaPredicted RBP7.87□□□□□ -1.15
SMAD4-217ENST00000611848 ZNF45Q02386 682 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 ACSM1Q08AH1 577 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 TPBGQ13641 420 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 SWI5Q1ZZU3 235 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 LINC00114Q6XXX2 140 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 TMPPEQ6ZT21 453 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 LNX2Q8N448 690 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 NAXEQ8NCW5 288 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 OR9Q1Q8NGQ5 310 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 PFN4Q8NHR9 129 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 FNDC9Q8TBE3 224 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 DNAJA4Q8WW22 397 aaPredicted RBP7.87□□□□□ -1.15
SMAD4-217ENST00000611848 C3orf49Q96BT1 292 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 OR5B2Q96R09 309 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 ZNF649Q9BS31 505 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 PRRG4Q9BZD6 226 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 OR52D1Q9H346 318 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 FN3KQ9H479 309 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 C20orf141Q9NUB4 165 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 CHCHD3Q9NX63 227 aaKnown RBP7.87□□□□□ -1.15
SMAD4-217ENST00000611848 PEX16Q9Y5Y5 336 aa7.87□□□□□ -1.15
SMAD4-217ENST00000611848 HCFC1P51610 2035 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 COL12A1Q99715 3063 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 HECTD1Q9ULT8 2610 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 A0A1B0GWA3 101 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 A0A1W2PNR3 127 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 TMEM72A0PK05 275 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 A8MVM7 634 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 ZNF670-ZNF695F2Z2N8 137 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 SULT2B1O00204 365 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 DNPH1O43598 174 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 PTP4A3O75365 173 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 PMS2P2O95744 297 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 CH25HO95992 272 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 F12P00748 615 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 PNMTP11086 282 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 IFI30P13284 250 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 SLC25A35Q3KQZ1 300 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 LIPKQ5VXJ0 399 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 ULK3Q6PHR2 472 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 PLXDC2Q6UX71 529 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 MAMDC2Q7Z304 686 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 ATG4DQ86TL0 474 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 GID4Q8IVV7 300 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 SLC43A2Q8N370 569 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 DRAXINQ8NBI3 349 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 FANK1Q8TC84 345 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 STK35Q8TDR2 534 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 INTS12Q96CB8 462 aaKnown RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 BPIFA2Q96DR5 249 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 TRMT61AQ96FX7 289 aaKnown RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 USB1Q9BQ65 265 aaKnown RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 SFXN3Q9BWM7 321 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 ASPNQ9BXN1 380 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 POTEKPQ9BYX7 375 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 RNF122Q9H9V4 155 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 KCNJ16Q9NPI9 418 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 MEPEQ9NQ76 525 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 HINT3Q9NQE9 182 aaKnown RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 GLRX2Q9NS18 164 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 SIGLEC7Q9Y286 467 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 TRAPPC4Q9Y296 219 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 SF3B6Q9Y3B4 125 aaKnown RBP7.86□□□□□ -1.15
SMAD4-217ENST00000611848 MED31Q9Y3C7 131 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 UGT2A1Q9Y4X1 527 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 FREM1Q5H8C1 2179 aa7.86□□□□□ -1.15
SMAD4-217ENST00000611848 A1L4Q6 167 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ISPDA4D126 451 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ELOA3DA6NLF2 546 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 AQP8O94778 261 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 SLC2A10O95528 541 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CLDN1O95832 211 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 GAAP10253 952 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 BMP5P22003 454 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ENPP1P22413 925 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 S100A5P33763 92 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 RPS19P39019 145 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 DIO1P49895 249 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 MYBPHQ13203 477 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 RNPS1Q15287 305 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CDSNQ15517 529 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ZNF239Q16600 458 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ELOA3BQ3SY89 546 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ALG10BQ5I7T1 473 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 ARMC4Q5T2S8 1044 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 OR2G6Q5TZ20 316 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CD200R1LQ6Q8B3 271 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 SMARCD3Q6STE5 483 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 C5orf46Q6UWT4 87 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 FCRLAQ7L513 359 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CXXC5Q7LFL8 322 aaKnown RBP7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CCDC190Q86UF4 302 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 LIX1LQ8IVB5 337 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 MCEMP1Q8IX19 187 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 CDK20Q8IZL9 346 aa7.85□□□□□ -1.15
SMAD4-217ENST00000611848 BBS1Q8NFJ9 593 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms