RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PUS1Q9Y606 427 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 BZW2Q9Y6E2 419 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-213ENST00000609587 PLB1Q6P1J6 1458 aa2.9□□□□□ -1.94
SMCHD1-213ENST00000609587 POLR3AO14802 1390 aaPredicted RBP2.9□□□□□ -1.94
SMCHD1-213ENST00000609587 C1orf232A0A0U1RR37 186 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 GSTTP1A0A1W2PQM5 241 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 TRIM49D1C9J1S8 452 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 RNF13O43567 381 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 KDELR3O43731 214 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 AHSA1O95433 338 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 OXSR1O95747 527 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 KLK3P07288 261 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 MX1P20591 662 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PSMB6P28072 239 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 IL12AP29459 219 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PRDX3P30048 256 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 DDOSTP39656 456 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 NAA10P41227 235 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PPP1R2P41236 205 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 CBX5P45973 191 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 DUSP3P51452 185 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 GPM6AP51674 278 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 RWDD2BP57060 319 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 TAS2R19P59542 299 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 VBP1P61758 197 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 RAB11AP62491 216 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 MERTKQ12866 999 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 DAZ2Q13117 558 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 DMC1Q14565 340 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 WDR43Q15061 677 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 RAB11BQ15907 218 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 ALKBH6Q3KRA9 238 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 CTSL3PQ5NE16 218 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 C1orf100Q5SVJ3 147 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 MARCH8Q5T0T0 291 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PLCXD3Q63HM9 321 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PPP1R2P3Q6NXS1 205 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 Q6ZN92 141 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 NDUFAF7Q7L592 441 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PRSS41Q7RTY9 318 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 VTCN1Q7Z7D3 282 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC26A11Q86WA9 606 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 KRTAP11-1Q8IUC1 163 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC34A3Q8N130 599 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 RNF175Q8N4F7 328 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PQLC3Q8N755 202 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 FAM86B1Q8N7N1 296 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 SNX31Q8N9S9 440 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 LINC01555Q8NAE3 123 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 OR10G3Q8NGC4 313 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 OR52H1Q8NGJ2 320 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 DTX3LQ8TDB6 740 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 FAM151AQ8WW52 585 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 PIBF1Q8WXW3 757 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 UFD1Q92890 307 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 CMTM7Q96FZ5 175 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 CHMP6Q96FZ7 201 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 CYYR1Q96J86 154 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC35E1Q96K37 410 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 COPS8Q99627 209 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC29A1Q99808 456 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 P2RY13Q9BPV8 354 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 C20orf85Q9H1P6 137 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 SGK2Q9HBY8 427 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 CSNK1G1Q9HCP0 422 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 DAZ3Q9NR90 486 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 BFARQ9NZS9 450 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 SEC14L3Q9UDX4 400 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 ENPP5Q9UJA9 477 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 NEUROG3Q9Y4Z2 214 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 NCOA3Q9Y6Q9 1424 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 NEURL4Q96JN8 1562 aa2.9□□□□□ -1.95
SMCHD1-213ENST00000609587 NINLQ9Y2I6 1382 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 NSG1A0A0A6YYJ2 146 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 WI2-2373I1.2A0A1W2PRP0 233 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 TMEM120BA0PK00 339 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 SNTNA6NMZ2 147 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 LOC110117498-PIK3R3F6TDL0 507 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 GPR171O14626 319 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ITGB1BP1O14713 200 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 CALUO43852 315 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 DFNA5O60443 496 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 NPIPB7O75200 414 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 OR2F2O95006 317 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 BRI3O95415 125 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 KLF8O95600 359 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 HLA-DRAP01903 254 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 PNMA6AP0CW24 399 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 OTX1P32242 354 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 GLP1RP43220 463 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ATP1B3P54709 279 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 EMP2P54851 167 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 CDH4P55283 916 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 IRF8Q02556 426 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 CKAP4Q07065 602 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF763Q0D2J5 394 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 SLAMF1Q13291 335 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 GPR176Q14439 515 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 SNCBQ16143 134 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 XKR7Q5GH72 579 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms