RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 OR1S1Q8NH92 325 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 APH1AQ96BI3 265 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 RCN3Q96D15 328 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TSNAXQ99598 290 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 SUCNR1Q9BXA5 334 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 RHOJQ9H4E5 214 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 KIR3DX1Q9H7L2 352 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 PTGES2Q9H7Z7 377 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 LANCL2Q9NS86 450 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 RBFOX1Q9NWB1 397 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 SCN3BQ9NY72 215 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 KIAA1456Q9P272 454 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ZDHHC2Q9UIJ5 367 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 POMT2Q9UKY4 750 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF346Q9UL40 294 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 FZD4Q9ULV1 537 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ROBO3Q96MS0 1386 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM129A0AVI4 362 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM150BA6NC51 233 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 NPEPPSL1A6NEC2 478 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF195O14628 629 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CEACAM4O75871 244 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TOX4O94842 621 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 MPIG6BO95866 241 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TGFB1P01137 390 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 HLA-DQB1P01920 261 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 F13BP05160 661 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 NBEAP1P0C6P0 100 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 GABRR1P24046 479 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 S100A2P29034 98 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TPBGQ13641 420 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 IMPG1Q17R60 797 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 SYTL3Q4VX76 610 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 FNBP1LQ5T0N5 605 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 NCMAPQ5T1S8 102 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 SAXO2Q658L1 398 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 LEMD1Q68G75 181 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ANKRD34AQ69YU3 496 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 GLYATQ6IB77 296 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TCTN3Q6NUS6 607 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ENPP7Q6UWV6 458 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 GDPD4Q6W3E5 623 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ZCCHC23Q6ZST2 131 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC29A4Q7RTT9 530 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ASCL5Q7RTU5 278 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 MYPOPQ86VE0 399 aaPredicted RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CBLN2Q8IUK8 224 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 LRRC56Q8IYG6 542 aaPredicted RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TDHQ8IZJ6 230 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM130Q8N3G9 435 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 C15orf54Q8N8G6 183 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 OR8J3Q8NGG0 315 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 OR10Q1Q8NGQ4 319 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 OR5R1Q8NH85 324 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 RNASEH2CQ8TDP1 164 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CXorf40AQ8TE69 158 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ACOT12Q8WYK0 555 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TFAP2BQ92481 460 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 SMPDL3BQ92485 455 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CDS1Q92903 461 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 UBE2FQ969M7 185 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CNN2Q99439 309 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 FOXQ1Q9C009 403 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CHST5Q9GZS9 411 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 IL1RL2Q9HB29 575 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 INPP5EQ9NRR6 644 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 NLE1Q9NVX2 485 aaPredicted RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 P2RX2Q9UBL9 471 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 NKX6-3A6NJ46 265 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 H0Y980 276 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 M0R143 59 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SERPINA1P01009 418 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ATP1B2P14415 290 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 FAHP16930 419 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 RCC1P18754 421 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 GZMHP20718 246 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 FDXRP22570 491 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 PSMB9P28065 219 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 TNFSF8P32971 234 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 EVX1P49640 407 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CYP2J2P51589 502 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 DYNLL1P63167 89 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 RAE1P78406 368 aaKnown RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SRSF1Q07955 248 aaKnown RBP eCLIP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 OPCMLQ14982 345 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 PEA15Q15121 130 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF79Q15937 498 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 UGCGQ16739 394 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CD276Q5ZPR3 534 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 OR8G2PQ6IF36 304 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 LCLAT1Q6UWP7 414 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 MOB2Q70IA6 237 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 LRRC28Q86X40 367 aaPredicted RBP4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 PLXDC1Q8IUK5 500 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC44A3Q8N4M1 653 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 CDRT4Q8N9R6 151 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 B3GNT7Q8NFL0 401 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2AP1Q8NGE2 309 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 THAP6Q8TBB0 222 aa4.52□□□□□ -1.69
SPTBN1-206ENST00000602898 RNF141Q8WVD5 230 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms