RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 OR8D4Q8NGM9 314 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 RASD2Q96D21 266 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 TSSK6Q9BXA6 273 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 PLA2G12AQ9BZM1 189 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 GABARAPL1Q9H0R8 117 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 ESRP2Q9H6T0 727 aaKnown RBP12.14□□□□□ -0.47
RNF40-212ENST00000602784 S100A14Q9HCY8 104 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 TACC2O95359 2948 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 A0A096LPE4 126 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 A0A1W2PPZ6 126 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 SIAH2O43255 324 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 OR8G3PP0DMU2 310 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 OSMP13725 252 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 HIST1H1CP16403 213 aaKnown RBP12.13□□□□□ -0.47
RNF40-212ENST00000602784 ZNF23P17027 643 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 NPR2P20594 1047 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 LOXP28300 417 aaPredicted RBP12.13□□□□□ -0.47
RNF40-212ENST00000602784 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
RNF40-212ENST00000602784 DAPP51397 102 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 SLC36A3Q495N2 470 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 CLEC12AQ5QGZ9 265 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 OR2T33Q8NG76 320 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 TEX47Q8TBZ9 253 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 PKP2Q99959 881 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 PAPOLBQ9NRJ5 636 aaKnown RBP12.13□□□□□ -0.47
RNF40-212ENST00000602784 TBC1D23Q9NUY8 699 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 B3GNT2Q9NY97 397 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 CRNNQ9UBG3 495 aaPredicted RBP12.13□□□□□ -0.47
RNF40-212ENST00000602784 UGT2A1Q9Y4X1 527 aa12.13□□□□□ -0.47
RNF40-212ENST00000602784 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.12□□□□□ -0.47
RNF40-212ENST00000602784 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
RNF40-212ENST00000602784 SOX14O95416 240 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 SLC2A10O95528 541 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
RNF40-212ENST00000602784 B4GALT1P15291 398 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 PTAFRP25105 342 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 CRABP1P29762 137 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 GUCA1AP43080 201 aaPredicted RBP12.12□□□□□ -0.47
RNF40-212ENST00000602784 FMODQ06828 376 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 ZNF362Q5T0B9 420 aaPredicted RBP12.12□□□□□ -0.47
RNF40-212ENST00000602784 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 KDM4DQ6B0I6 523 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 TMEM108Q6UXF1 575 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 FOXL2NBQ6ZUU3 175 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 JAZF1Q86VZ6 243 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 NPEPL1Q8NDH3 523 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
RNF40-212ENST00000602784 STMN2Q93045 179 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 PLPPR2Q96GM1 343 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 SYT4Q9H2B2 425 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 SEMA6AQ9H2E6 1030 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 CLEC4MQ9H2X3 399 aaPredicted RBP12.12□□□□□ -0.47
RNF40-212ENST00000602784 NPAP1Q9NZP6 1156 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 KIF17Q9P2E2 1029 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 OAZ3Q9UMX2 235 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 FBN2P35556 2912 aa12.12□□□□□ -0.47
RNF40-212ENST00000602784 NOTCH2Q04721 2471 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 A0A1W2PR80 420 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 H3BN98 237 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 H7C1C5 153 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 KHDRBS3O75525 346 aaKnown RBP12.11□□□□□ -0.47
RNF40-212ENST00000602784 SEC14L2O76054 403 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 RENP00797 406 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 IGLV1-44P01699 117 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 CBR1P16152 277 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 CTLA4P16410 223 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 GRK5P34947 590 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 ARR3P36575 388 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 GIPRP48546 466 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 LCN6P62502 163 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 ESRRGP62508 458 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 SLC35F1Q5T1Q4 408 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 ALKBH2Q6NS38 261 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 SLC27A4Q6P1M0 643 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 SKA3Q8IX90 412 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 OR52E2Q8NGJ4 325 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 OR4Q3Q8NH05 313 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 OR4K13Q8NH42 304 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 NSMAFQ92636 917 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 PIK3IP1Q96FE7 263 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 RADILQ96JH8 1075 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 NMNAT3Q96T66 252 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 DDOQ99489 341 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 KRT84Q9NSB2 600 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 ZNF224Q9NZL3 707 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 KLHL21Q9UJP4 597 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 FBXL3Q9UKT7 428 aa12.11□□□□□ -0.47
RNF40-212ENST00000602784 HRNRQ86YZ3 2850 aaPredicted RBP12.11□□□□□ -0.47
RNF40-212ENST00000602784 SLC16A7O60669 478 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms