RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ZNF446Q9NWS9 450 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 ATRQ13535 2644 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 SHOX2O60902 331 aaPredicted RBP13.59□□□□□ -0.23
VRK3-221ENST00000600284 SNAP29O95721 258 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 CHN2P52757 468 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 PLP2Q04941 152 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 RUNX1T1Q06455 604 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 SF3A3Q12874 501 aaKnown RBP eCLIP13.59□□□□□ -0.23
VRK3-221ENST00000600284 RIN1Q13671 783 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 ARMC4Q5T2S8 1044 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 SLC30A7Q8NEW0 376 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 RCN3Q96D15 328 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 TPD52L3Q96J77 140 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 HOPXQ9BPY8 73 aaPredicted RBP13.59□□□□□ -0.23
VRK3-221ENST00000600284 LRMDAQ9H2I8 198 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 KCNN2Q9H2S1 579 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 TXNIPQ9H3M7 391 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 SIAEQ9HAT2 523 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 CMTM6Q9NX76 183 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 ZNF346Q9UL40 294 aaKnown RBP13.59□□□□□ -0.23
VRK3-221ENST00000600284 A4GNTQ9UNA3 340 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 HIF3AQ9Y2N7 669 aa13.59□□□□□ -0.23
VRK3-221ENST00000600284 FBN1P35555 2871 aaKnown RBP13.59□□□□□ -0.23
VRK3-221ENST00000600284 IQCMA0A1B0GVH7 501 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 GMNCA6NCL1 334 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 CCDC22O60826 627 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 RAD52P43351 418 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 SELENOVP59797 346 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 MRPS34P82930 218 aaKnown RBP13.58□□□□□ -0.24
VRK3-221ENST00000600284 LAPTM4AQ15012 233 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 TBC1D28Q2M2D7 210 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 ANKDD1AQ495B1 522 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 RGS7BPQ6MZT1 257 aaPredicted RBP13.58□□□□□ -0.24
VRK3-221ENST00000600284 SLC15A3Q8IY34 581 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 SYT14Q8NB59 555 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 MOSPD2Q8NHP6 518 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 FNDC8Q8TC99 324 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 BPIFA2Q96DR5 249 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 SYT3Q9BQG1 590 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 BCL2L14Q9BZR8 327 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 CDH20Q9HBT6 801 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 MED4Q9NPJ6 270 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 ARMCX1Q9P291 453 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 GPR160Q9UJ42 338 aa13.58□□□□□ -0.24
VRK3-221ENST00000600284 CUBNO60494 3623 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 NDUFAB1O14561 156 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 LILRA1O75019 489 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 TGFAP01135 160 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 IFNW1P05000 195 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 COX4I1P13073 169 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 HNF1AP20823 631 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 IGFBP5P24593 272 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 MRPS11P82912 194 aaKnown RBP13.57□□□□□ -0.24
VRK3-221ENST00000600284 MYBPC1Q00872 1141 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 TRAM2Q15035 370 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 ALG10Q5BKT4 473 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 LRP11Q86VZ4 500 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 RNF113BQ8IZP6 322 aaKnown RBP13.57□□□□□ -0.24
VRK3-221ENST00000600284 POU5F2Q8N7G0 328 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 RBM15BQ8NDT2 890 aaKnown RBP13.57□□□□□ -0.24
VRK3-221ENST00000600284 TMEM158Q8WZ71 300 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 RDH5Q92781 318 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
VRK3-221ENST00000600284 ALG12Q9BV10 488 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 FNDC11Q9BVV2 318 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 TPK1Q9H3S4 243 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 CHODLQ9H9P2 273 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 EFCAB1Q9HAE3 211 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 DUSP13Q9UII6 198 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 COL6A5A8TX70 2615 aa13.57□□□□□ -0.24
VRK3-221ENST00000600284 IGLV3-9A0A075B6K5 115 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 IGHMP01871 453 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 MMP7P09237 267 aaPredicted RBP13.56□□□□□ -0.24
VRK3-221ENST00000600284 IFI30P13284 250 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 ZNF250P15622 560 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 ACHEP22303 614 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
VRK3-221ENST00000600284 ALDH3B1P43353 468 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 UCP2P55851 309 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 RPL27P61353 136 aaKnown RBP13.56□□□□□ -0.24
VRK3-221ENST00000600284 LIPEQ05469 1076 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 MOGQ16653 247 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 ELFN2Q5R3F8 820 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 FAM120AOSQ5T036 256 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 FAM205BPQ63HN1 556 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 HACD2Q6Y1H2 254 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 CBLL1Q75N03 491 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 OFCC1Q8IZS5 231 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 ARIH2OSQ8N7S6 290 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 ZNF519Q8TB69 540 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 GEMIN6Q8WXD5 167 aaKnown RBP13.56□□□□□ -0.24
VRK3-221ENST00000600284 C11orf40Q8WZ69 217 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 HDAC2Q92769 488 aaKnown RBP13.56□□□□□ -0.24
VRK3-221ENST00000600284 C1orf159Q96HA4 380 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 RBP7Q96R05 134 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 SLCO1C1Q9NYB5 712 aa13.56□□□□□ -0.24
VRK3-221ENST00000600284 RTTNQ86VV8 2226 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 LRP5LA4QPB2 252 aa13.55□□□□□ -0.24
VRK3-221ENST00000600284 RNF212BA8MTL3 300 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms