RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 GSSP48637 474 aa12□□□□□ -0.49
IRF3-225ENST00000600022 DIO1P49895 249 aa12□□□□□ -0.49
IRF3-225ENST00000600022 PRKCDQ05655 676 aa12□□□□□ -0.49
IRF3-225ENST00000600022 CD47Q08722 323 aa12□□□□□ -0.49
IRF3-225ENST00000600022 PTGES3Q15185 160 aaKnown RBP12□□□□□ -0.49
IRF3-225ENST00000600022 KRTAP24-1Q3LI83 254 aa12□□□□□ -0.49
IRF3-225ENST00000600022 TIMM23BQ5SRD1 257 aa12□□□□□ -0.49
IRF3-225ENST00000600022 C6orf141Q5SZD1 244 aa12□□□□□ -0.49
IRF3-225ENST00000600022 LINC00114Q6XXX2 140 aa12□□□□□ -0.49
IRF3-225ENST00000600022 ST8SIA1Q92185 356 aa12□□□□□ -0.49
IRF3-225ENST00000600022 BPIFA2Q96DR5 249 aa12□□□□□ -0.49
IRF3-225ENST00000600022 Q96MT0 163 aa12□□□□□ -0.49
IRF3-225ENST00000600022 SLC38A2Q96QD8 506 aa12□□□□□ -0.49
IRF3-225ENST00000600022 TBC1D23Q9NUY8 699 aa12□□□□□ -0.49
IRF3-225ENST00000600022 CLN6Q9NWW5 311 aa12□□□□□ -0.49
IRF3-225ENST00000600022 KLHL9Q9P2J3 617 aa12□□□□□ -0.49
IRF3-225ENST00000600022 ANK2Q01484 3957 aa12□□□□□ -0.49
IRF3-225ENST00000600022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.497e-9■■■■■ 30
IRF3-225ENST00000600022 A0A087WUJ7 227 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 ZNF716A6NP11 495 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 ZNF724A8MTY0 619 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 EFCAB9A8MZ26 197 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 KPNA4O00629 521 aaPredicted RBP11.99□□□□□ -0.49
IRF3-225ENST00000600022 SOX14O95416 240 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 IFNA2P01563 188 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 CCDC159P0C7I6 412 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 CXCR1P25024 350 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 GPR4P46093 362 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 HTR3AP46098 478 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 NUDT6P53370 316 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 GABARAPL2P60520 117 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 CXCR4P61073 352 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 ISL1P61371 349 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 TUBA4AP68366 448 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 TEKQ02763 1124 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 SELENBP1Q13228 472 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 CDK5R2Q13319 367 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 MAD2L1BPQ15013 274 aaPredicted RBP11.99□□□□□ -0.49
IRF3-225ENST00000600022 AGAP6Q5VW22 663 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 SLC27A4Q6P1M0 643 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 PTCHD4Q6ZW05 846 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 GRINAQ7Z429 371 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 CCDC103Q8IW40 242 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 ZNF100Q8IYN0 542 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 CLDN22Q8N7P3 220 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 TRUB1Q8WWH5 349 aaKnown RBP11.99□□□□□ -0.49
IRF3-225ENST00000600022 TMEM158Q8WZ71 300 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 PLEKHA8Q96JA3 519 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 ARL5BQ96KC2 179 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 TNFRSF13CQ96RJ3 184 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 ADAM19Q9H013 955 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 CCNB1IP1Q9NPC3 277 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 REV1Q9UBZ9 1251 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 SNX5Q9Y5X3 404 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 SLC25A15Q9Y619 301 aa11.99□□□□□ -0.49
IRF3-225ENST00000600022 IGKV1D-42A0A075B6H8 117 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 SNTNA6NMZ2 147 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 M0R3G1 203 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 FAM20BO75063 409 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 IGF2P01344 180 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 HMGN1P05114 100 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 FAM157CP0CG43 387 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 ATP6V1B1P15313 513 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 CD40P25942 277 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 LSM11P83369 360 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■■■■□ 19.8
IRF3-225ENST00000600022 C9orf135Q5VTT2 229 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 SLX4IPQ5VYV7 408 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 FBXW9Q5XUX1 488 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 SLC22A25Q6T423 547 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 TMPPEQ6ZT21 453 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 IL17RELQ6ZVW7 336 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 TMPRSS11FQ6ZWK6 438 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 UBE2J2Q8N2K1 259 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 WDR31Q8NA23 367 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 BPIFB6Q8NFQ5 453 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 FANK1Q8TC84 345 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 ZNF566Q969W8 418 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 SGTBQ96EQ0 304 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 DHRS9Q9BPW9 319 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 TMEM43Q9BTV4 400 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 OR11A1Q9GZK7 315 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 BARX1Q9HBU1 254 aaPredicted RBP11.98□□□□□ -0.49
IRF3-225ENST00000600022 PCDHGB5Q9Y5G0 923 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 CDH10Q9Y6N8 788 aa11.98□□□□□ -0.49
IRF3-225ENST00000600022 SLC35F4A4IF30 521 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 M0R1B8 84 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 SULT2B1O00204 365 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 PIP5K1CO60331 668 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 ITGA5P08648 1049 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 CCNA2P20248 432 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 EPHA2P29317 976 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 TACR3P29371 465 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 SLC9A3P48764 834 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 FABP6P51161 128 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 POLR2HP52434 150 aaKnown RBP11.97□□□□□ -0.49
IRF3-225ENST00000600022 GINS1Q14691 196 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 GABRA6Q16445 453 aa11.97□□□□□ -0.49
IRF3-225ENST00000600022 C5orf46Q6UWT4 87 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms