RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 POMPQ9Y244 141 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 ATP23Q9Y6H3 246 aa9.68□□□□□ -0.86
VRK3-210ENST00000596121 SLC22A23A1A5C7 686 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 AQP12BA6NM10 295 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 TNFRSF11BO00300 401 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 ARHGEF9O43307 516 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 OR10H3O60404 316 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 NDUFS7O75251 213 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 NDUFB2O95178 105 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 GASTP01350 101 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 IGFBP1P08833 259 aaPredicted RBP9.67□□□□□ -0.86
VRK3-210ENST00000596121 CD79AP11912 226 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 PAX1P15863 534 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 ZNF14P17017 642 aaPredicted RBP9.67□□□□□ -0.86
VRK3-210ENST00000596121 FPR3P25089 353 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 ARR3P36575 388 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 RPL4P36578 427 aaKnown RBP9.67□□□□□ -0.86
VRK3-210ENST00000596121 CDKN1AP38936 164 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 CAPZA2P47755 286 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 GIPRP48546 466 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 ERFP50548 548 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 RAB1AP62820 205 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 CHRNB3Q05901 458 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 NPRL3Q12980 569 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 MST1LQ2TV78 715 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 C3orf36Q3SXR2 165 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 OTPQ5XKR4 325 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 TMEM179BQ7Z7N9 219 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 DTX2Q86UW9 622 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 AQP12AQ8IXF9 295 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 PIGTQ969N2 578 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 GTPBP3Q969Y2 492 aaKnown RBP9.67□□□□□ -0.86
VRK3-210ENST00000596121 SLCO4A1Q96BD0 722 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 GPX7Q96SL4 187 aaPredicted RBP9.67□□□□□ -0.86
VRK3-210ENST00000596121 ALG12Q9BV10 488 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 CHID1Q9BWS9 393 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 TRIM15Q9C019 465 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 ZNF701Q9NV72 531 aaPredicted RBP9.67□□□□□ -0.86
VRK3-210ENST00000596121 EDARQ9UNE0 448 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 AURKCQ9UQB9 309 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 IER3IP1Q9Y5U9 82 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 U3KQV3 271 aa9.67□□□□□ -0.86
VRK3-210ENST00000596121 IGHV2OR16-5A0A0B4J2B6 119 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 TEX13CA0A0J9YWL9 993 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 TCRBV3S1A0A5B6 114 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 A6NIZ1 184 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 SMPD2O60906 423 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 KRT36O76013 467 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 PPP1R3DO95685 299 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 TXNDC12O95881 172 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 MMP7P09237 267 aaPredicted RBP9.66□□□□□ -0.86
VRK3-210ENST00000596121 OR8G3PP0DMU2 310 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 RAP2AP10114 183 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 ZNF35P13682 527 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 TTKP33981 857 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 CDKN2AP42771 156 aaKnown RBP9.66□□□□□ -0.86
VRK3-210ENST00000596121 PTDSS1P48651 473 aaKnown RBP9.66□□□□□ -0.86
VRK3-210ENST00000596121 PTH2RP49190 550 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 RAP1BP61224 184 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 RAP1AP62834 184 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 NKX6-1P78426 367 aaPredicted RBP9.66□□□□□ -0.86
VRK3-210ENST00000596121 MRPS34P82930 218 aaKnown RBP9.66□□□□□ -0.86
VRK3-210ENST00000596121 CD47Q08722 323 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 FLOT2Q14254 428 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 RAB39AQ14964 217 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 MSMPQ1L6U9 139 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 GSG1Q2KHT4 349 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 RFX4Q33E94 735 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 FAM98BQ52LJ0 330 aaKnown RBP9.66□□□□□ -0.86
VRK3-210ENST00000596121 OR2T5Q6IEZ7 315 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 C11orf71Q6IPW1 123 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 SMARCD3Q6STE5 483 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 DPY19L2P2Q6ZN68 376 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 FOXL2NBQ6ZUU3 175 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 PTCHD4Q6ZW05 846 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 CCDC36Q8IYA8 594 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 LRRC75A-AS1Q8N1F1 130 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 LRRC18Q8N456 261 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 OR2T29Q8NH02 315 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 GNPDA2Q8TDQ7 276 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 TMEM171Q8WVE6 324 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 PERPQ96FX8 193 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 SAMD8Q96LT4 415 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 LRGUKQ96M69 825 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 FOXN4Q96NZ1 517 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 GSX2Q9BZM3 304 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 OR52D1Q9H346 318 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 EGLN3Q9H6Z9 239 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 SMURF2Q9HAU4 748 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 GRHPRQ9UBQ7 328 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 POU2F3Q9UKI9 436 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 TMCC3Q9ULS5 477 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 MTORP42345 2549 aa9.66□□□□□ -0.86
VRK3-210ENST00000596121 FLNAP21333 2647 aaKnown RBP9.66□□□□□ -0.86
VRK3-210ENST00000596121 DHRS12A0PJE2 317 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 PRSS37A4D1T9 235 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 SOCS2O14508 198 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 MGRN1O60291 552 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 TP53P04637 393 aaPredicted RBP9.65□□□□□ -0.86
VRK3-210ENST00000596121 CTLA4P16410 223 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms