RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SLC16A14Q7RTX9 510 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 MYPOPQ86VE0 399 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 SKA3Q8IX90 412 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 FAM168AQ92567 244 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 RBP7Q96R05 134 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 ZNF347Q96SE7 839 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 RAB1BQ9H0U4 201 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 ZNF224Q9NZL3 707 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 SLC7A8Q9UHI5 535 aa15.36■□□□□ 0.05
SHKBP1-204ENST00000594862 A0A087WUU8 490 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 NDUFS8O00217 210 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 F12P00748 615 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 TP53P04637 393 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 ZNF35P13682 527 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 MAKP20794 623 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 THBS4P35443 961 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 GUCA1AP43080 201 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 PLP2Q04941 152 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 MST1LQ2TV78 715 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 THEM4Q5T1C6 240 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 SYT14Q8NB59 555 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 OR10H5Q8NGA6 315 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 OR4K5Q8NGD3 323 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 OR1J2Q8NGS2 313 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 MCUR1Q96AQ8 359 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 NSMCE2Q96MF7 247 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 ZNF75AQ96N20 296 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 KCNK17Q96T54 332 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 LRMDAQ9H2I8 198 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 RNF121Q9H920 327 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 SIAEQ9HAT2 523 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 CMAHPQ9Y471 501 aa15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 NSD1Q96L73 2696 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-204ENST00000594862 hCG_2039718K7EN88 272 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 AHCYL1O43865 530 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 GLRXP35754 106 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 EVX1P49640 407 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 CTXN1P60606 82 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 PPP2R2BQ00005 443 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 RUNX1T1Q06455 604 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 TOP3AQ13472 1001 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 LAPTM4AQ15012 233 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 FGD3Q5JSP0 725 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 RNF148Q8N7C7 305 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 OR51A7Q8NH64 312 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 SLC7A13Q8TCU3 470 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 DYNLRB1Q9NP97 96 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 NDUFAF4Q9P032 175 aa15.34■□□□□ 0.05
SHKBP1-204ENST00000594862 TRAV27A0A087WT01 109 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 IQCMA0A1B0GVH7 501 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 XKRYO14609 159 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 SNAP29O95721 258 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 RPL4P36578 427 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 PDLIM4P50479 330 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 MYBPC1Q00872 1141 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 RAB39AQ14964 217 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 TBC1D28Q2M2D7 210 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 ZBED5Q49AG3 693 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 KRT80Q6KB66 452 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 ARHGAP24Q8N264 748 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 RBM15BQ8NDT2 890 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 SLC30A7Q8NEW0 376 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 OR13C2Q8NGS9 318 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 NEU4Q8WWR8 484 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 HDAC2Q92769 488 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 POP5Q969H6 163 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 NMD3Q96D46 503 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 PYURFQ96I23 114 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 C7orf34Q96L11 122 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 CCT8L2Q96SF2 557 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 CDRT15Q96T59 188 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 SH3GL3Q99963 347 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 VRK1Q99986 396 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 CDH20Q9HBT6 801 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 ARL8BQ9NVJ2 186 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 GRHPRQ9UBQ7 328 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 ZNF346Q9UL40 294 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 ALPK2Q86TB3 2170 aa15.33■□□□□ 0.04
SHKBP1-204ENST00000594862 FAM107AO95990 144 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 CD14P08571 375 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 TCN1P20061 433 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 GPR4P46093 362 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 MTX3Q5HYI7 312 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 GPR139Q6DWJ6 353 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 PODNL1Q6PEZ8 512 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 UNQ6126/PRO20091Q6UXV3 157 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 Q71RC1 249 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 DEFB107AQ8IZN7 70 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 ZNF525Q8N782 197 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 ARIH2OSQ8N7S6 290 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 LRRC75AQ8NAA5 344 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 ZNF519Q8TB69 540 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 C10orf105Q8TEF2 133 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 MRPL24Q96A35 216 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 DHRS1Q96LJ7 313 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 SORCS2Q96PQ0 1159 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 TSPAN32Q96QS1 320 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 TNFRSF13CQ96RJ3 184 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 WACQ9BTA9 647 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms