RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-219	ENST00000593101		A8MXE2	369 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	RPL36A-HNRNPH2	H7BZ11	118 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	GYPB	P06028	91 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	CTLA4	P16410	223 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ZNF133	P52736	654 aa	Predicted RBP	13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	RPS7	P62081	194 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ETFDH	Q16134	617 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	CEACAM16	Q2WEN9	425 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	KLHL12	Q53G59	568 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	C9orf135	Q5VTT2	229 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MEDAG	Q5VYS4	303 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101		Q6ZT83	130 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	USP51	Q70EK9	711 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	LINGO2	Q7L985	606 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	THAP5	Q7Z6K1	395 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MRGPRG	Q86SM5	289 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	PROKR2	Q8NFJ6	384 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	LILRB4	Q8NHJ6	448 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	CA5BP1	Q8WTZ4	195 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	NMD3	Q96D46	503 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101		Q96MT0	163 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	HCAR1	Q9BXC0	346 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	NMNAT2	Q9BZQ4	307 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	SEC61A2	Q9H9S3	476 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	AASS	Q9UDR5	926 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MALT1	Q9UDY8	824 aa		13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	COA3	Q9Y2R0	106 aa	Predicted RBP	13.69	□□□□□ -0.22
PRKCSH-219	ENST00000593101	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	IGKV1D-43	A0A0B4J1Z2	117 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101		A0A1W2PPL8	197 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	HLA-DQA2	P01906	255 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	CLU	P10909	449 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	SPI1	P17947	270 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MPG	P29372	298 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	PYCR1	P32322	319 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ISL1	P61371	349 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	OCLN	Q16625	522 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	SLC25A35	Q3KQZ1	300 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	SLC25A30	Q5SVS4	291 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	C10orf128	Q5T292	105 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	AADACL4	Q5VUY2	407 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	NXNL2	Q5VZ03	156 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	XKRX	Q6PP77	449 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MEPCE	Q7L2J0	689 aa	Known RBP	13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ZBTB46	Q86UZ6	589 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	GLB1L2	Q8IW92	636 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	RELL2	Q8NC24	303 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	BBS1	Q8NFJ9	593 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	OR51L1	Q8NGJ5	315 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ZNF837	Q96EG3	531 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	CNBD2	Q96M20	576 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ANKRD60	Q9BZ19	345 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MOK	Q9UQ07	419 aa		13.68	□□□□□ -0.22
PRKCSH-219	ENST00000593101	INTS1	Q8N201	2190 aa	Known RBP	13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	FAM208B	Q5VWN6	2430 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	IGLV1-36	A0A0B4J1U3	117 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	CIB4	A0PJX0	185 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	SNTN	A6NMZ2	147 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	DCTN6	O00399	190 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	PRODH	O43272	600 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	DENR	O43583	198 aa	Known RBP	13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ZG16	O60844	167 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ENTPD6	O75354	484 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	GABRB1	P18505	474 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	IGHV1-2	P23083	117 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	MYF6	P23409	242 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	LAP3	P28838	519 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	FOXG1	P55316	489 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ARF1	P84077	181 aa	Known RBP	13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	TGFBR3	Q03167	851 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	DBP	Q10586	325 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	APOF	Q13790	326 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	P2RY6	Q15077	328 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	STK11	Q15831	433 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	SGCA	Q16586	387 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	SLC35D3	Q5M8T2	416 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	CXorf67	Q86X51	503 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	GID4	Q8IVV7	300 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	GABRG1	Q8N1C3	465 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	RFK	Q969G6	155 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	LRRC46	Q96FV0	321 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ZNF582	Q96NG8	517 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	FOXN4	Q96NZ1	517 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	TEAD3	Q99594	435 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	RACGAP1	Q9H0H5	632 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	KCNJ16	Q9NPI9	418 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ELOVL5	Q9NYP7	299 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	TAS2R16	Q9NYV7	291 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	DNAJC27	Q9NZQ0	273 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	JKAMP	Q9P055	326 aa		13.67	□□□□□ -0.22
PRKCSH-219	ENST00000593101	FAM90A27P	A6NNH2	459 aa		13.66	□□□□□ -0.22
PRKCSH-219	ENST00000593101	ZNF99	A8MXY4	864 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKCSH-219	ENST00000593101	LYZL6	O75951	148 aa		13.66	□□□□□ -0.22
PRKCSH-219	ENST00000593101	GLCE	O94923	617 aa		13.66	□□□□□ -0.22
PRKCSH-219	ENST00000593101	PLA2G2A	P14555	144 aa		13.66	□□□□□ -0.22
PRKCSH-219	ENST00000593101	NPR2	P20594	1047 aa		13.66	□□□□□ -0.22

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