RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 FOXB1Q99853 325 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 C9orf16Q9BUW7 83 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 SLC17A5Q9NRA2 495 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 ZNF226Q9NYT6 803 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 KCNN3Q9UGI6 736 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 ENOPH1Q9UHY7 261 aa16.79■□□□□ 0.28
DDX39A-214ENST00000590556 H0YHG0 523 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 THBDP07204 575 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 CRISP1P54107 249 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 ESRRGP62508 458 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 DAG1Q14118 895 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 TBRG1Q3YBR2 411 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 HIST2H2BCQ6DN03 193 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 KLHL24Q6TFL4 600 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 WFDC8Q8IUA0 241 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 CBR4Q8N4T8 237 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 OR52N5Q8NH56 324 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 EME1Q96AY2 570 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 SNX18Q96RF0 628 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 NMNAT3Q96T66 252 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 SYT4Q9H2B2 425 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 TMEM38BQ9NVV0 291 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 TMEFF2Q9UIK5 374 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-214ENST00000590556 KLHL21Q9UJP4 597 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 PRR14LQ5THK1 2151 aa16.78■□□□□ 0.28
DDX39A-214ENST00000590556 IGKV1D-43A0A0B4J1Z2 117 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 A0A1W2PR80 420 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 EI24O14681 340 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 RRP9O43818 475 aaKnown RBP16.77■□□□□ 0.28
DDX39A-214ENST00000590556 HOXB1P14653 301 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-214ENST00000590556 B4GALT1P15291 398 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 GRK5P34947 590 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 UBE2NP61088 152 aaKnown RBP16.77■□□□□ 0.28
DDX39A-214ENST00000590556 CDK5Q00535 292 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 PPA1Q15181 289 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 ACSM5Q6NUN0 579 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 ZBTB49Q6ZSB9 765 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 ZNF627Q7L945 461 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 SSX8Q7RTT4 187 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 WDR31Q8NA23 367 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 SDR9C7Q8NEX9 313 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 TEX12Q9BXU0 123 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 NELFAQ9H3P2 528 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 RERGLQ9H628 205 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 DCLRE1BQ9H816 532 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 USE1Q9NZ43 259 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 AMDHD2Q9Y303 409 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 UGT2A1Q9Y4X1 527 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 ORC6Q9Y5N6 252 aa16.77■□□□□ 0.28
DDX39A-214ENST00000590556 RIIAD1A6NNX1 92 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 SLC16A7O60669 478 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 WNT11O96014 354 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 IFNGP01579 166 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 HMGN1P05114 100 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 ALPLP05186 524 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 CTLA4P16410 223 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 ALDH3A2P51648 485 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 C1QTNF12Q5T7M4 302 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 TMEM236Q5W0B7 351 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 DNM1P34Q6PK57 102 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 SLC22A24Q8N4F4 322 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 NPEPL1Q8NDH3 523 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 NUAK2Q9H093 628 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 SLC25A19Q9HC21 320 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 OBP2BQ9NPH6 170 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 SLC25A15Q9Y619 301 aa16.76■□□□□ 0.27
DDX39A-214ENST00000590556 ARPC4-TTLL3A0A0A6YYG9 625 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 A0A1W2PPL8 197 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 OR6C68A6NDL8 312 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 KHDRBS3O75525 346 aaKnown RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 OR8G3PP0DMU2 310 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CRYGSP22914 178 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CRABP1P29762 137 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CDAP32320 146 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 GUCA1AP43080 201 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CAPZA2P47755 286 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 MRPS34P82930 218 aaKnown RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 DAZAP2Q15038 168 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 PTGES3Q15185 160 aaKnown RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 TRIP10Q15642 601 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 ETFDHQ16134 617 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 SGCAQ16586 387 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 ZNF362Q5T0B9 420 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CCDC36Q8IYA8 594 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CYB561A3Q8NBI2 242 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 SLC37A3Q8NCC5 494 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 TSSK2Q96PF2 358 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 SLC29A1Q99808 456 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 RIBC2Q9H4K1 309 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 SEC61A2Q9H9S3 476 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 SRA1Q9HD15 236 aaKnown RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 NGBQ9NPG2 151 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 RPRD1BQ9NQG5 326 aaKnown RBP16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CMC2Q9NRP2 79 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 CENPEQ02224 2701 aa16.75■□□□□ 0.27
DDX39A-214ENST00000590556 FARS2O95363 451 aaKnown RBP16.74■□□□□ 0.27
DDX39A-214ENST00000590556 ZNF3P17036 446 aa16.74■□□□□ 0.27
DDX39A-214ENST00000590556 NPR2P20594 1047 aa16.74■□□□□ 0.27
DDX39A-214ENST00000590556 RAD23AP54725 363 aa16.74■□□□□ 0.27
DDX39A-214ENST00000590556 TUBA1BP68363 451 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms