RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 THEM4Q5T1C6 240 aa11.3□□□□□ -0.6
DDX39A-213ENST00000590315 KDM4DQ6B0I6 523 aa11.3□□□□□ -0.6
DDX39A-213ENST00000590315 TUBA1AQ71U36 451 aa11.3□□□□□ -0.6
DDX39A-213ENST00000590315 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-213ENST00000590315 CYB561A3Q8NBI2 242 aa11.3□□□□□ -0.6
DDX39A-213ENST00000590315 HTRA1Q92743 480 aa11.3□□□□□ -0.6
DDX39A-213ENST00000590315 SLC38A2Q96QD8 506 aa11.3□□□□□ -0.6
DDX39A-213ENST00000590315 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
DDX39A-213ENST00000590315 PRRG3Q9BZD7 231 aa11.3□□□□□ -0.6
DDX39A-213ENST00000590315 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
DDX39A-213ENST00000590315 DOPEY1Q5JWR5 2465 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 FASNP49327 2511 aaKnown RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 RPL36A-HNRNPH2H7BZ11 118 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 ARPC3O15145 178 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 KHDRBS3O75525 346 aaKnown RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 TXNDC12O95881 172 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 HLA-DQA2P01906 255 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 CD79AP11912 226 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PPP3CBP16298 524 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PAICSP22234 425 aaKnown RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 CDAP32320 146 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 CRMP1Q14194 572 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PPA1Q15181 289 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PTGES3Q15185 160 aaKnown RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 TBRG1Q3YBR2 411 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 HIST2H2BCQ6DN03 193 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 ACSM5Q6NUN0 579 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 ANKRD16Q6P6B7 361 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PARP8Q8N3A8 854 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 LNX2Q8N448 690 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 LRRC18Q8N456 261 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 SLC37A3Q8NCC5 494 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 C1orf162Q8NEQ5 155 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PROKR2Q8NFJ6 384 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 OR9Q1Q8NGQ5 310 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 NANOS1Q8WY41 292 aaKnown RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 WFIKKN1Q96NZ8 548 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 PSMG3-AS1Q96PY0 264 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 C1QTNF6Q9BXI9 259 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 KCNN2Q9H2S1 579 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 VCXQ9H320 206 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 SLC24A3Q9HC58 644 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 SRA1Q9HD15 236 aaKnown RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 TVP23BQ9NYZ1 205 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 TMEFF2Q9UIK5 374 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-213ENST00000590315 POLR1DQ9Y2S0 133 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 AMDHD2Q9Y303 409 aa11.29□□□□□ -0.6
DDX39A-213ENST00000590315 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 OR5H1A6NKK0 313 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 FAM171A2A8MVW0 826 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 AHCYL1O43865 530 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 WNT11O96014 354 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 HMGN1P05114 100 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 ALPLP05186 524 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 CTLA4P16410 223 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 CRABP1P29762 137 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 GIPRP48546 466 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 SLC34A1Q06495 639 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 NPRL3Q12980 569 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 TAB1Q15750 504 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 TIMM23BQ5SRD1 257 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 C10orf128Q5T292 105 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 C17orf78Q8N4C9 275 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 TSSK2Q96PF2 358 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
DDX39A-213ENST00000590315 NUAK2Q9H093 628 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 RNF121Q9H920 327 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 RNPEPL1Q9HAU8 725 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 SLC17A5Q9NRA2 495 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 TMEM38BQ9NVV0 291 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 USE1Q9NZ43 259 aa11.28□□□□□ -0.6
DDX39A-213ENST00000590315 VSX1Q9NZR4 365 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-213ENST00000590315 NKX1-2Q9UD57 310 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-213ENST00000590315 OR6C68A6NDL8 312 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 FAM183AA6NL82 134 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 PRR23D1E9PI22 279 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-213ENST00000590315 M0R129 80 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 M0R1B8 84 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 GYPBP06028 91 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 PRR23D2P0DMB1 279 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-213ENST00000590315 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 PYCR1P32322 319 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 ZNF83P51522 516 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 RPS7P62081 194 aaKnown RBP11.27□□□□□ -0.61
DDX39A-213ENST00000590315 CDK5Q00535 292 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 PIGFQ07326 219 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 DBPQ10586 325 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-213ENST00000590315 ETFDHQ16134 617 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 HIST3H3Q16695 136 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 SLC16A14Q7RTX9 510 aa11.27□□□□□ -0.61
DDX39A-213ENST00000590315 P2RY8Q86VZ1 359 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms