RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CLDN6P56747 220 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 CPEB2Q7Z5Q1 589 aaKnown RBP13.24□□□□□ -0.29
RETREG3-208ENST00000589797 TPRA1Q86W33 373 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 GLB1L2Q8IW92 636 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 CMIPQ8IY22 773 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 ZNF100Q8IYN0 542 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 KIAA1143Q96AT1 154 aaPredicted RBP13.24□□□□□ -0.29
RETREG3-208ENST00000589797 MSANTD3Q96H12 275 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 MENTQ9BUN1 341 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 NOX3Q9HBY0 568 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 MMP25Q9NPA2 562 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 SLCO1C1Q9NYB5 712 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 FLVCR2Q9UPI3 526 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 PCDHGB2Q9Y5G2 931 aa13.24□□□□□ -0.29
RETREG3-208ENST00000589797 CENPBD1B2RD01 187 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 TNFSF14O43557 240 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 RPS18P62269 152 aaKnown RBP13.23□□□□□ -0.29
RETREG3-208ENST00000589797 FOXF1Q12946 379 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 DCAF12Q5T6F0 453 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ARSKQ6UWY0 536 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ARL5BQ96KC2 179 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 NECAB3Q96P71 396 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-208ENST00000589797 SELENOIQ9C0D9 397 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ERVMER34-1Q9H9K5 563 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 RDH8Q9NYR8 311 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 CIB4A0PJX0 185 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 A6NIZ1 184 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ZSCAN5BA6NJL1 495 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 M0QYG6 137 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 M0R233 179 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ZNF432O94892 652 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 HOXC4P09017 264 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-208ENST00000589797 UBE2MP61081 183 aaKnown RBP13.23□□□□□ -0.29
RETREG3-208ENST00000589797 RAP1BP61224 184 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 RAP1AP62834 184 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 CDK5R1Q15078 307 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ZNF74Q16587 644 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 NDUFA5Q16718 116 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 SLC22A10Q63ZE4 541 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 SSX6Q7RTT6 188 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 BOLLQ8N9W6 283 aaKnown RBP13.23□□□□□ -0.29
RETREG3-208ENST00000589797 OR1N1Q8NGS0 311 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 OR52I2Q8NH67 350 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ADAMTS14Q8WXS8 1223 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 NAA11Q9BSU3 229 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-208ENST00000589797 AUNIPQ9H7T9 357 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 KLK11Q9UBX7 282 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 TRABD2BA6NFA1 517 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 MASP2O00187 686 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ZFPL1O95159 310 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 SIX6O95475 246 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 GPR176Q14439 515 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 BEX5Q5H9J7 111 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 SLC16A9Q7RTY1 509 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 MDGA2Q7Z553 956 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 PLCZ1Q86YW0 608 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 CCDC107Q8WV48 283 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 GIMAP1Q8WWP7 306 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 CREB3L1Q96BA8 519 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 POTEKPQ9BYX7 375 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ABRACLQ9P1F3 81 aa13.23□□□□□ -0.29
RETREG3-208ENST00000589797 ALDOBP05062 364 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 ZPLD1Q8TCW7 415 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 C1orf198Q9H425 327 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 METTL17Q9H7H0 456 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-208ENST00000589797 PHYHO14832 338 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 FABP7O15540 132 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SYNGR4O95473 234 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SERPINA2P20848 420 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 GABRR1P24046 479 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 HSF1Q00613 529 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 TOMM40LQ969M1 308 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 ZNF845Q96IR2 970 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SRRQ9GZT4 340 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 CST11Q9H112 138 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 OCIAD1Q9NX40 245 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 MOKQ9UQ07 419 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SLC5A6Q9Y289 635 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 TRIM64CA6NLI5 447 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 FAM166BA8MTA8 275 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SLC33A1O00400 549 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-208ENST00000589797 TFP02787 698 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 TCRBP04435 133 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 AMY2BP19961 511 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 HOXC12P31275 282 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SSR4P51571 173 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 CEBPGP53567 150 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 DMWDQ09019 674 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 ABCA11PQ4W5N1 156 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 MIB2Q96AX9 1013 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SEC22AQ96IW7 307 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 CCNL2Q96S94 520 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-208ENST00000589797 SEC22CQ9BRL7 303 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 WNT16Q9UBV4 365 aa13.22□□□□□ -0.29
RETREG3-208ENST00000589797 TMEM184BQ9Y519 407 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-208ENST00000589797 HMX3A6NHT5 357 aa13.21□□□□□ -0.29
RETREG3-208ENST00000589797 ACOT7O00154 380 aa13.21□□□□□ -0.29
RETREG3-208ENST00000589797 NR2C1P13056 603 aa13.21□□□□□ -0.29
RETREG3-208ENST00000589797 POU3F2P20265 443 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-208ENST00000589797 HTR3AP46098 478 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms