RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 ZNF385AQ96PM9 386 aaKnown RBP18.78■□□□□ 0.6
R3HDM4-204ENST00000589428 PARPBPQ9NWS1 579 aa18.78■□□□□ 0.6
R3HDM4-204ENST00000589428 PRR23D1E9PI22 279 aaPredicted RBP18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 SLC1A7O00341 560 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 XPNPEP2O43895 674 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 PRR23D2P0DMB1 279 aaPredicted RBP18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 PAICSP22234 425 aaKnown RBP18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 OR3A2P47893 321 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 CLDN17P56750 224 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 MEDAGQ5VYS4 303 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 ZNF474Q6S9Z5 364 aaPredicted RBP18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 BEND4Q6ZU67 534 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 OR9Q1Q8NGQ5 310 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 TMEM45BQ96B21 275 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 NMNAT2Q9BZQ4 307 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 HCFC1P51610 2035 aa18.77■□□□□ 0.6
R3HDM4-204ENST00000589428 PRSS37A4D1T9 235 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 A6NIZ1 184 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 CLUP10909 449 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 PEX19P40855 299 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 RAP1BP61224 184 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 RAP1AP62834 184 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 NXNL2Q5VZ03 156 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 NIPAL3Q6P499 406 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 BPIFB6Q8NFQ5 453 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 ZNF566Q969W8 418 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 Q96MT0 163 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 KCNK17Q96T54 332 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 RHNO1Q9BSD3 238 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 AMBNQ9NP70 447 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 ELOVL5Q9NYP7 299 aa18.77■□□□□ 0.59
R3HDM4-204ENST00000589428 SH3D21A4FU49 640 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 SLC35F4A4IF30 521 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 CRHBPP24387 322 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 COL8A1P27658 744 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 CD79BP40259 229 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 CXCR4P61073 352 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 SP5Q6BEB4 398 aaPredicted RBP18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 MEX3BQ6ZN04 569 aaKnown RBP18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 OR6X1Q8NH79 312 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 SNX18Q96RF0 628 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 SYT4Q9H2B2 425 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 RPRD1BQ9NQG5 326 aaKnown RBP18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 VSX1Q9NZR4 365 aaPredicted RBP18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 HECTD1Q9ULT8 2610 aa18.76■□□□□ 0.59
R3HDM4-204ENST00000589428 PRODHO43272 600 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 TRMUO75648 421 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 GYPBP06028 91 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 RPSAP08865 295 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 SLC2A5P22732 501 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 SORDQ00796 357 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 RBM48Q5RL73 367 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 AAED1Q7RTV5 226 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 HDDC2Q7Z4H3 204 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 SLC25A44Q96H78 314 aaPredicted RBP18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 ADAD1Q96M93 576 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 TSSK2Q96PF2 358 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 MRPL13Q9BYD1 178 aaKnown RBP18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 MYRFQ9Y2G1 1151 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 ADGRG4Q8IZF6 3080 aa18.75■□□□□ 0.59
R3HDM4-204ENST00000589428 SLC22A23A1A5C7 686 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 AKAP8O43823 692 aaKnown RBP18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 RENP00797 406 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 CCDC159P0C7I6 412 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 PGA4P0DJD7 388 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 PGA3P0DJD8 388 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 COX6B1P14854 86 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 IGFBP2P18065 325 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 NTF4P34130 210 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 CDH11P55287 796 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 CAMK2DQ13557 499 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 GID4Q8IVV7 300 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 TMEM123Q8N131 208 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 UBE2J2Q8N2K1 259 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 SYT14Q8NB59 555 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 NOXO1Q8NFA2 376 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 OR2M2Q96R28 347 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 PLCXD1Q9NUJ7 323 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 PRSS50Q9UI38 385 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 DCTN6O00399 190 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 FAM20BO75063 409 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 ZNF432O94892 652 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 TNFAIP8O95379 198 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 IGHG1P01857 330 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 SPI1P17947 270 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 SLC25A1P53007 311 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 ZNF91Q05481 1191 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 FAM27E3Q08E93 113 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 APOFQ13790 326 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 ZNRF4Q8WWF5 429 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 KISS1RQ969F8 398 aaPredicted RBP18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 SPOCK3Q9BQ16 436 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 OR51V1Q9H2C8 321 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 SLC24A3Q9HC58 644 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 PAK1IP1Q9NWT1 392 aaPredicted RBP18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 ASB6Q9NWX5 421 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 RCE1Q9Y256 329 aa18.74■□□□□ 0.59
R3HDM4-204ENST00000589428 CCDC182A6NF36 153 aa18.73■□□□□ 0.59
R3HDM4-204ENST00000589428 ZNF726A6NNF4 738 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms