RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PRG3Q9Y2Y8 225 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 AKNAQ7Z591 1439 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 NFASCO94856 1347 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 MAP3K15Q6ZN16 1313 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 IGLV11-55A0A075B6I3 123 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 TRBV11-1A0A0K0K1C0 115 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 C9JVG2 144 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 PPP1R2P9O14990 202 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CLOCKO15516 846 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 RNF13O43567 381 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 ICOSLGO75144 302 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 SS18L1O75177 396 aaPredicted RBP2.22□□□□□ -2.05
SMAD4-207ENST00000589076 SUPT3HO75486 399 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 C6orf47O95873 294 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 BGLAPP02818 100 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CNR1P21554 472 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 OMGP23515 440 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 AK4P27144 223 aaPredicted RBP2.22□□□□□ -2.05
SMAD4-207ENST00000589076 NAA10P41227 235 aaPredicted RBP2.22□□□□□ -2.05
SMAD4-207ENST00000589076 NSG1P42857 185 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CCR6P51684 374 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 ACLYP53396 1101 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CDH6P55285 790 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 PRMT2P55345 433 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 SRSF5Q13243 272 aaKnown RBP2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CLINT1Q14677 625 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CARD17Q5XLA6 110 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 SLC8B1Q6J4K2 584 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 SASS6Q6UVJ0 657 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 ABHD13Q7L211 337 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 TTC5Q8N0Z6 440 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 PDIK1LQ8N165 341 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 BBS5Q8N3I7 341 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 EID2Q8N6I1 236 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 HSD17B11Q8NBQ5 300 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 LKAAEAR1Q8TD35 194 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 ACMSDQ8TDX5 336 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 TMEM158Q8WZ71 300 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 ELMO1Q92556 727 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 PIK3IP1Q96FE7 263 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 TSNARE1Q96NA8 513 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 P2RX4Q99571 388 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 GABARAPL3Q9BY60 117 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 RACGAP1Q9H0H5 632 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CDC42EP4Q9H3Q1 356 aaKnown RBP2.22□□□□□ -2.05
SMAD4-207ENST00000589076 CWH43Q9H720 699 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 SAMSN1Q9NSI8 373 aaKnown RBP2.22□□□□□ -2.05
SMAD4-207ENST00000589076 DCAF16Q9NXF7 216 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 RAB26Q9ULW5 256 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 F11RQ9Y624 299 aaKnown RBP2.22□□□□□ -2.05
SMAD4-207ENST00000589076 WSB1Q9Y6I7 421 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 NOTCH1P46531 2555 aa2.22□□□□□ -2.05
SMAD4-207ENST00000589076 PLAC8L1A1L4L8 177 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 LRRIQ3A6PVS8 624 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 CDC7O00311 574 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 AIM2O14862 343 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 EEDO75530 441 aaKnown RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 CLIC3O95833 236 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 IGLV2-23P01705 113 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 KRT14P02533 472 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 FTH1P02794 183 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 HOXC4P09017 264 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 CALM1P0DP23 149 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 CALM2P0DP24 149 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 CALM3P0DP25 149 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 ZNF30P17039 623 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 RRM2P31350 389 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 OTX1P32242 354 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 CXCL5P42830 114 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 MNAT1P51948 309 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 ADARB1P78563 741 aaKnown RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 BEX3Q00994 111 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 TWF1Q12792 350 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 RCN1Q15293 331 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 RSPO1Q2MKA7 263 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 TTLL9Q3SXZ7 439 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 HSP90AB3PQ58FF7 597 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 TSPO2Q5TGU0 170 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 Q6P435 159 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 LYPD2Q6UXB3 125 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 LINC00173Q6ZV60 143 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 STRADAQ7RTN6 431 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 ASCL5Q7RTU5 278 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 LINC01551Q86U37 167 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 ENTHD1Q8IYW4 607 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 ZNF786Q8N393 782 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 GTPBP8Q8N3Z3 284 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 FBXL13Q8NEE6 735 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 MARCH1Q8TCQ1 289 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 SLC38A4Q969I6 547 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 LRRC58Q96CX6 371 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 FAM192AQ9GZU8 254 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 RPF2Q9H7B2 306 aaKnown RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 NEK6Q9HC98 313 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 FGF20Q9NP95 211 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 SLCO1B3Q9NPD5 702 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 RBAKQ9NYW8 714 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 UXTQ9UBK9 157 aaPredicted RBP2.21□□□□□ -2.06
SMAD4-207ENST00000589076 KIAA1257Q9ULG3 409 aa2.21□□□□□ -2.06
SMAD4-207ENST00000589076 NSD2O96028 1365 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms