RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 LGALS14Q8TCE9 139 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF431Q8TF32 576 aaPredicted RBP13.2□□□□□ -0.3
CCDC43-203ENST00000588210 SNX33Q8WV41 574 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 OR14A2Q96R54 314 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF222Q9UK12 451 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 CLEC4AQ9UMR7 237 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 IER3IP1Q9Y5U9 82 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 MPDZO75970 2070 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 TRBV2A0A0J9YWF9 115 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 A0A1W2PPK0 400 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF879B4DU55 563 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 MAGEB4O15481 346 aaPredicted RBP13.2□□□□□ -0.3
CCDC43-203ENST00000588210 H2AFB2P0C5Z0 115 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 EDNRAP25101 427 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ITGA3P26006 1051 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 OR3A3P47888 321 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 P2RX3P56373 397 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 PON3Q15166 354 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 GSG1Q2KHT4 349 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ZBTB37Q5TC79 503 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 PCSK4Q6UW60 755 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 DPY19L2P2Q6ZN68 376 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 FGD2Q7Z6J4 655 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 SYT9Q86SS6 491 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 OR4N2Q8NGD1 307 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 VSTM2LQ96N03 204 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 DDOQ99489 341 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ACTR6Q9GZN1 396 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 EMC3Q9P0I2 261 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 RPS6KB2Q9UBS0 482 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 GNG8Q9UK08 70 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ELF5Q9UKW6 265 aaPredicted RBP13.2□□□□□ -0.3
CCDC43-203ENST00000588210 MED13Q9UHV7 2174 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
CCDC43-203ENST00000588210 A0A1B0GVI7 797 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ARPC3O15145 178 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ATXN7O15265 892 aaPredicted RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 TMEM127O75204 238 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 PPM1BO75688 479 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 SERPINA7P05543 415 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 SULT1A3P0DMM9 295 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 SULT1A4P0DMN0 295 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 PSMD4P55036 377 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 PER3P56645 1201 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 Q0VFX4 171 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ELAVL1Q15717 326 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ESPNLQ6ZVH7 1005 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 LUZP2Q86TE4 346 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 EXD3Q8N9H8 876 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 FDCSPQ8NFU4 85 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 OR51L1Q8NGJ5 315 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 M1APQ8TC57 530 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ABHD17AQ96GS6 310 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 NMNAT2Q9BZQ4 307 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 PNO1Q9NRX1 252 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 MGAT4AQ9UM21 535 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 COPS3Q9UNS2 423 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 AK6Q9Y3D8 172 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 A0A087WUJ7 227 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 MEIKINA0A087WXM9 373 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 IFNA16P05015 189 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 SPI1P17947 270 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 CCR6P51684 374 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 SLC26A5P58743 744 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 IKZF1Q13422 519 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 JMJD6Q6NYC1 403 aaPredicted RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 NPEPL1Q8NDH3 523 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 OR56B4Q8NH76 319 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF671Q8TAW3 534 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 GIMAP1Q8WWP7 306 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 DAZLQ92904 295 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 PELOQ9BRX2 385 aaKnown RBP13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ADAM18Q9Y3Q7 739 aa13.19□□□□□ -0.3
CCDC43-203ENST00000588210 ATMQ13315 3056 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 A8MUA0 341 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF593O00488 134 aaPredicted RBP13.18□□□□□ -0.3
CCDC43-203ENST00000588210 PDCD5O14737 125 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 NOS1APO75052 506 aaPredicted RBP13.18□□□□□ -0.3
CCDC43-203ENST00000588210 MT-ND4P03905 459 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 TPOP07202 933 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 CXCL3P19876 107 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 GDNFP39905 211 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 RPS4XP62701 263 aaKnown RBP13.18□□□□□ -0.3
CCDC43-203ENST00000588210 NPSR1Q6W5P4 371 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 ZNRF4Q8WWF5 429 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 DGAT2Q96PD7 388 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 CITED4Q96RK1 184 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 GPX7Q96SL4 187 aaPredicted RBP13.18□□□□□ -0.3
CCDC43-203ENST00000588210 AUNIPQ9H7T9 357 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 MMP25Q9NPA2 562 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 PPIEQ9UNP9 301 aaKnown RBP13.18□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF337Q9Y3M9 751 aa13.18□□□□□ -0.3
CCDC43-203ENST00000588210 GPR171O14626 319 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms