RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 CAMK2DQ13557 499 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 CCNIQ14094 377 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 GK3PQ14409 553 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 PPA1Q15181 289 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 AGAP6Q5VW22 663 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 CARD17Q5XLA6 110 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 CYB5R2Q6BCY4 276 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 HDDC2Q7Z4H3 204 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 ZER1Q7Z7L7 766 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 ZNF433Q8N7K0 673 aaPredicted RBP13.67□□□□□ -0.22
NCLN-203ENST00000587740 OR4C15Q8NGM1 316 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 OR6X1Q8NH79 312 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 GNPDA2Q8TDQ7 276 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 SLCO4A1Q96BD0 722 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 LRR1Q96L50 414 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
NCLN-203ENST00000587740 B3GAT2Q9NPZ5 323 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 VNN3Q9NY84 501 aa13.67□□□□□ -0.22
NCLN-203ENST00000587740 ARFGEF3Q5TH69 2177 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 UPK3AO75631 287 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 SLC25A16P16260 332 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 TTKP33981 857 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 RPL4P36578 427 aaKnown RBP13.66□□□□□ -0.22
NCLN-203ENST00000587740 DSCR9P59020 149 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 CTXN1P60606 82 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 LGALS3BPQ08380 585 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 MELKQ14680 651 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 STK11Q15831 433 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 MICAQ29983 383 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 C9orf135Q5VTT2 229 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 C1orf94Q6P1W5 598 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 TMEM123Q8N131 208 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 OR9Q2Q8NGE9 314 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 OR6N1Q8NGY5 312 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 C10orf105Q8TEF2 133 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 ALKBH3Q96Q83 286 aaPredicted RBP13.66□□□□□ -0.22
NCLN-203ENST00000587740 CBLN4Q9NTU7 201 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 STX18Q9P2W9 335 aaKnown RBP13.66□□□□□ -0.22
NCLN-203ENST00000587740 SIGLEC7Q9Y286 467 aa13.66□□□□□ -0.22
NCLN-203ENST00000587740 NPIPB13A6NJU9 1138 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 NPIPB4C9JG80 1138 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 M0R3G1 203 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 PDLIM1O00151 329 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 PTP4A3O75365 173 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 E2F6O75461 281 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 RAD51DO75771 328 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 NDUFB2O95178 105 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 ITGA5P08648 1049 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 SRD5A1P18405 259 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 FPR3P25089 353 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 CSNK1A1P48729 337 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 FOXG1P55316 489 aaPredicted RBP13.65□□□□□ -0.22
NCLN-203ENST00000587740 ROR2Q01974 943 aaKnown RBP13.65□□□□□ -0.22
NCLN-203ENST00000587740 SPOCK1Q08629 439 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 TSPAN31Q12999 210 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 FHL1Q13642 323 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 OR7E24Q6IFN5 339 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 PGBD2Q6P3X8 592 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 B3GLCTQ6Y288 498 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 IGFN1Q86VF2 1251 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 C20orf196Q8IYI0 205 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 LRRC75AQ8NAA5 344 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 ASB10Q8WXI3 467 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 FAM168AQ92567 244 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 DUS3LQ96G46 650 aaKnown RBP13.65□□□□□ -0.22
NCLN-203ENST00000587740 SLC25A44Q96H78 314 aaPredicted RBP13.65□□□□□ -0.22
NCLN-203ENST00000587740 GPA33Q99795 319 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 TXNIPQ9H3M7 391 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 ARMC1Q9NVT9 282 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 DNAJB9Q9UBS3 223 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 AP4S1Q9Y587 144 aa13.65□□□□□ -0.22
NCLN-203ENST00000587740 TENM1Q9UKZ4 2725 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 RPL36A-HNRNPH2H7BZ11 118 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 DEAF1O75398 565 aaPredicted RBP13.64□□□□□ -0.23
NCLN-203ENST00000587740 TIPRLO75663 272 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 LY6HO94772 140 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 IGHG1P01857 330 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
NCLN-203ENST00000587740 GSSP48637 474 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 ARHGDIAP52565 204 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 CLRN1P58418 232 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 RPL27P61353 136 aaKnown RBP13.64□□□□□ -0.23
NCLN-203ENST00000587740 TOP3AQ13472 1001 aaPredicted RBP13.64□□□□□ -0.23
NCLN-203ENST00000587740 KPNB1Q14974 876 aaKnown RBP13.64□□□□□ -0.23
NCLN-203ENST00000587740 RAB35Q15286 201 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 ZSCAN26Q16670 478 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 TIMM23BQ5SRD1 257 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 SMARCD3Q6STE5 483 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 WDFY1Q8IWB7 410 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 C10orf67Q8IYJ2 551 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 GIPC3Q8TF64 312 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 DHRS9Q9BPW9 319 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 KATNB1Q9BVA0 655 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 CRLF2Q9HC73 371 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 GPR35Q9HC97 309 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 ZNF346Q9UL40 294 aaKnown RBP13.64□□□□□ -0.23
NCLN-203ENST00000587740 MGAT4BQ9UQ53 548 aa13.64□□□□□ -0.23
NCLN-203ENST00000587740 CENPBD1B2RD01 187 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms