RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SELENOPP49908 381 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 ZNF133P52736 654 aaPredicted RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 BLVRAP53004 296 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 PMPCAQ10713 525 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 ST3GAL4Q11206 333 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 POU4F2Q12837 409 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 FOXF2Q12947 444 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 CAMK2DQ13557 499 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 EIF2S3LQ2VIR3 472 aaKnown RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 KLHL12Q53G59 568 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 RNLSQ5VYX0 342 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 OR2A2Q6IF42 318 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 ZNF773Q6PK81 442 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 AHSA2Q719I0 299 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 AAED1Q7RTV5 226 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 PRSS48Q7RTY5 328 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 ATCAYQ86WG3 371 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 PRR7Q8TB68 274 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 ZNRF4Q8WWF5 429 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 SGCDQ92629 289 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 LGALS12Q96DT0 336 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 RNFT2Q96EX2 444 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 RBP7Q96R05 134 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 RACGAP1Q9H0H5 632 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 FGF20Q9NP95 211 aaPredicted RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 GLRX2Q9NS18 164 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 NOSIPQ9Y314 301 aaKnown RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 MEMO1Q9Y316 297 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 PCDHGB1Q9Y5G3 927 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 IGLV1-36A0A0B4J1U3 117 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 J3QRE1 110 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 CCL21O00585 134 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 RGS10O43665 173 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 IL2RAP01589 272 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 GYPBP06028 91 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 EDNRAP25101 427 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 DCKP27707 260 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 GSTT1P30711 240 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 NTF4P34130 210 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 CDH15P55291 814 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 LCN1P1Q5VSP4 162 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 VWA1Q6PCB0 445 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 DNM1P34Q6PK57 102 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 NUFIP2Q7Z417 695 aaKnown RBP13.2□□□□□ -0.3
NFIX-208ENST00000587260 FJX1Q86VR8 437 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 NOXO1Q8NFA2 376 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 TMEM54Q969K7 222 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 TSSK2Q96PF2 358 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 CDCA4Q9BXL8 241 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 MARCH7Q9H992 704 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 SRA1Q9HD15 236 aaKnown RBP13.2□□□□□ -0.3
NFIX-208ENST00000587260 ERVK-18Q9QC07 812 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 SCOCQ9UIL1 159 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 FOXD3Q9UJU5 478 aaPredicted RBP13.2□□□□□ -0.3
NFIX-208ENST00000587260 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
NFIX-208ENST00000587260 EMC9Q9Y3B6 208 aa13.2□□□□□ -0.3
NFIX-208ENST00000587260 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
NFIX-208ENST00000587260 E9PLN8 166 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 SLC16A7O60669 478 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 MRPL33O75394 65 aaKnown RBP13.19□□□□□ -0.3
NFIX-208ENST00000587260 FADS2O95864 444 aaKnown RBP13.19□□□□□ -0.3
NFIX-208ENST00000587260 IGHV3-9P01782 118 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 STSP08842 583 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 CTLA4P16410 223 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 TIMP3P35625 211 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 CLRN1P58418 232 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 DBPQ10586 325 aaPredicted RBP13.19□□□□□ -0.3
NFIX-208ENST00000587260 GUSBP1Q15486 140 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 C20orf196Q8IYI0 205 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 SPARTQ8N0X7 666 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 POMGNT2Q8NAT1 580 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 OR52I1Q8NGK6 324 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 TMEM80Q96HE8 168 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 VKORC1Q9BQB6 163 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 MRPS26Q9BYN8 205 aaKnown RBP13.19□□□□□ -0.3
NFIX-208ENST00000587260 PARPBPQ9NWS1 579 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 GLTPQ9NZD2 209 aa13.19□□□□□ -0.3
NFIX-208ENST00000587260 A0A0G2JNJ9 132 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 PYCARD-AS1I3L0S3 204 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 KHDRBS3O75525 346 aaKnown RBP13.18□□□□□ -0.3
NFIX-208ENST00000587260 IGHA1P01876 353 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 SBK2P0C263 348 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 C21orf33P30042 268 aaPredicted RBP13.18□□□□□ -0.3
NFIX-208ENST00000587260 RPS7P62081 194 aaKnown RBP13.18□□□□□ -0.3
NFIX-208ENST00000587260 IRF3Q14653 427 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 LRFN4Q6PJG9 635 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 FAM214BQ7L5A3 538 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 PROKR2Q8NFJ6 384 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 OR51L1Q8NGJ5 315 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 MCHR2Q969V1 340 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 ALKBH3Q96Q83 286 aaPredicted RBP13.18□□□□□ -0.3
NFIX-208ENST00000587260 DMRTA2Q96SC8 542 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 ADGRL4Q9HBW9 690 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 Q9UFV3 132 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
NFIX-208ENST00000587260 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms