RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 WACQ9BTA9 647 aa12.32□□□□□ -0.44
TPM4-205ENST00000586833 BDH2Q9BUT1 245 aa12.32□□□□□ -0.44
TPM4-205ENST00000586833 DGCR6LQ9BY27 220 aa12.32□□□□□ -0.44
TPM4-205ENST00000586833 CXorf56Q9H5V9 222 aa12.32□□□□□ -0.44
TPM4-205ENST00000586833 NPAP1Q9NZP6 1156 aa12.32□□□□□ -0.44
TPM4-205ENST00000586833 CRNNQ9UBG3 495 aaPredicted RBP12.32□□□□□ -0.44
TPM4-205ENST00000586833 AP4S1Q9Y587 144 aa12.32□□□□□ -0.44
TPM4-205ENST00000586833 IER3IP1Q9Y5U9 82 aa12.32□□□□□ -0.44
TPM4-205ENST00000586833 UTP20O75691 2785 aaKnown RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 ADGRG4Q8IZF6 3080 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 ARPC3O15145 178 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 KHDRBS3O75525 346 aaKnown RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 SEC14L2O76054 403 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 GASTP01350 101 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 ANXA8P13928 327 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 FASP25445 335 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 NPRL3Q12980 569 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 FHL1Q13642 323 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 FAM122BQ7Z309 247 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 OR4F15Q8NGB8 312 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 TEX47Q8TBZ9 253 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 TMEM171Q8WVE6 324 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 GTPBP3Q969Y2 492 aaKnown RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 ZNF837Q96EG3 531 aaPredicted RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 SAMD8Q96LT4 415 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 Q96M85 177 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 SEC61A2Q9H9S3 476 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 TBC1D23Q9NUY8 699 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 ARMC1Q9NVT9 282 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 BEX4Q9NWD9 120 aaPredicted RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 PDP1Q9P0J1 537 aaPredicted RBP12.31□□□□□ -0.44
TPM4-205ENST00000586833 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 PLEKHA6Q9Y2H5 1048 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 ADAM18Q9Y3Q7 739 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 ATP23Q9Y6H3 246 aa12.31□□□□□ -0.44
TPM4-205ENST00000586833 IQCMA0A1B0GVH7 501 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 A0A1W2PPL8 197 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 SLC22A23A1A5C7 686 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 SOCS2O14508 198 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 SLC2A10O95528 541 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 PPP1R3DO95685 299 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 IFNGP01579 166 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 HLA-HP01893 362 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 PTDSS1P48651 473 aaKnown RBP12.3□□□□□ -0.44
TPM4-205ENST00000586833 IDH3GP51553 393 aaPredicted RBP12.3□□□□□ -0.44
TPM4-205ENST00000586833 RAB1AP62820 205 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 TUBA1BP68363 451 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 TUBA4AP68366 448 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 HSF2Q03933 536 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 SGCAQ16586 387 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 MESTQ5EB52 335 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 AGAP6Q5VW22 663 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 ZFP1Q6P2D0 407 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 SLC25A47Q6Q0C1 308 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 CD300LDQ6UXZ3 194 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 TUBA1AQ71U36 451 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 MDP1Q86V88 176 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 HIPK1Q86Z02 1210 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 FBXL14Q8N1E6 418 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 ATG16L2Q8NAA4 619 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 KBTBD8Q8NFY9 601 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 OR2T33Q8NG76 320 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 OR1J2Q8NGS2 313 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 MBD6Q96DN6 1003 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 GPA33Q99795 319 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 NELFAQ9H3P2 528 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 VSX1Q9NZR4 365 aaPredicted RBP12.3□□□□□ -0.44
TPM4-205ENST00000586833 IL20RAQ9UHF4 553 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 FBXO9Q9UK97 447 aaPredicted RBP12.3□□□□□ -0.44
TPM4-205ENST00000586833 ITGB1BP2Q9UKP3 347 aa12.3□□□□□ -0.44
TPM4-205ENST00000586833 IGHV1-18A0A0C4DH31 117 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 C12orf71A8MTZ7 269 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 H3BN98 237 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 SMPD2O60906 423 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 ATE1O95260 518 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 IGLV1-44P01699 117 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 MSR1P21757 451 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 GIPRP48546 466 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 FABP6P51161 128 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 GALK2Q01415 458 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 NAAAQ02083 359 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 PIGFQ07326 219 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 PPP1R8Q12972 351 aaKnown RBP12.29□□□□□ -0.44
TPM4-205ENST00000586833 CLEC12AQ5QGZ9 265 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 ZNF770Q6IQ21 691 aaPredicted RBP12.29□□□□□ -0.44
TPM4-205ENST00000586833 SHQ1Q6PI26 577 aaKnown RBP12.29□□□□□ -0.44
TPM4-205ENST00000586833 UNQ6126/PRO20091Q6UXV3 157 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 THSD4Q6ZMP0 1018 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 YTHDF3Q7Z739 585 aaKnown RBP12.29□□□□□ -0.44
TPM4-205ENST00000586833 SKA3Q8IX90 412 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 ALDH16A1Q8IZ83 802 aa12.29□□□□□ -0.44
TPM4-205ENST00000586833 SMAP2Q8WU79 429 aaPredicted RBP12.29□□□□□ -0.44
TPM4-205ENST00000586833 RASD2Q96D21 266 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms