RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TCEAL3Q969E4 200 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 SGCZQ96LD1 299 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 CDC6Q99741 560 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 ANGPTL4Q9BY76 406 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 SLC22A4Q9H015 551 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 CDCP1Q9H5V8 836 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 PPP1R3EQ9H7J1 279 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 TIGARQ9NQ88 270 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 CYSLTR2Q9NS75 346 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 SACM1LQ9NTJ5 587 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 RASD1Q9Y272 281 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 RPH3AQ9Y2J0 694 aaPredicted RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 CHCHD2Q9Y6H1 151 aaPredicted RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 CNOT1A5YKK6 2376 aaKnown RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 ZZEF1O43149 2961 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 TRBV5-5A0A0J9YX44 114 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 A0A1W2PQ09 198 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 LNP1A1A4G5 178 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 C1QTNF9BB2RNN3 333 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 ZNF593O00488 134 aaPredicted RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 SNPHO15079 494 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 MAGEB4O15481 346 aaPredicted RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 WISP1O95388 367 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 CSF3P09919 207 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 C1QTNF9P0C862 333 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 JMJD7P0C870 316 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 SLC2A2P11168 524 aaPredicted RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 ZNF823P16415 610 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 THBS2P35442 1172 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 RANBP1P43487 201 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 CCR9P51686 369 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 DSCR4P56555 118 aaPredicted RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 SLC35A1P78382 337 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 MELKQ14680 651 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 SLC17A1Q14916 467 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 BAK1Q16611 211 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 Q499Y3 187 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 TEX30Q5JUR7 227 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 CDCP2Q5VXM1 449 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 SLC22A10Q63ZE4 541 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 MZT2BQ6NZ67 158 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 IL20RBQ6UXL0 311 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 DPY19L4Q7Z388 723 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 NAXDQ8IW45 347 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 UEVLDQ8IX04 471 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 ZNF679Q8IYX0 411 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 GTPBP8Q8N3Z3 284 aaPredicted RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 TMEM156Q8N614 296 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 NLGN4YQ8NFZ3 816 aaPredicted RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 OR2G2Q8NGZ5 317 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 PAQR8Q8TEZ7 354 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 CHAC2Q8WUX2 184 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 NTNG2Q96CW9 530 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 ARL5BQ96KC2 179 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 RBP7Q96R05 134 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 OR14A2Q96R54 314 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 PDCD1LG2Q9BQ51 273 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 TSPAN10Q9H1Z9 355 aaPredicted RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 PPIL3Q9H2H8 161 aaKnown RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 ZNF160Q9HCG1 818 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 SH2D2AQ9NP31 389 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 NOX4Q9NPH5 578 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 HPF1Q9NWY4 346 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 KLHL9Q9P2J3 617 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 EXTL2Q9UBQ6 330 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 TBC1D24Q9ULP9 559 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 FARSAQ9Y285 508 aaKnown RBP10.11□□□□□ -0.79
LIG3-204ENST00000585740 KLHDC2Q9Y2U9 406 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 EML6Q6ZMW3 1958 aa10.11□□□□□ -0.79
LIG3-204ENST00000585740 CCDC187A0A096LP49 1063 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 PRR32B1ATL7 298 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 B4DXG7 233 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 H3BML4 177 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 DVL2O14641 736 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 TM4SF5O14894 197 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 ZNF254O75437 659 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 AQP8O94778 261 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 RPP14O95059 124 aaKnown RBP10.1□□□□□ -0.79
LIG3-204ENST00000585740 ZFPL1O95159 310 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 HRGP04196 525 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 SPARCP09486 303 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 PRKAR1AP10644 381 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 EPXP11678 715 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 NR2C1P13056 603 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 CD59P13987 128 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 IFNGR1P15260 489 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 CTLA4P16410 223 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 ZNF17P17021 662 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 SRMP19623 302 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 TCN2P20062 427 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 PTGS2P35354 604 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 NR4A2P43354 598 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 INPP1P49441 399 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 RIDAP52758 137 aaKnown RBP10.1□□□□□ -0.79
LIG3-204ENST00000585740 OR2B6P58173 313 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 NANOS3P60323 173 aaKnown RBP10.1□□□□□ -0.79
LIG3-204ENST00000585740 GPR85P60893 370 aa10.1□□□□□ -0.79
LIG3-204ENST00000585740 RPS15P62841 145 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms