RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 BCL7BQ9BQE9 202 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 FNDC11Q9BVV2 318 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 ANKRD19PQ9H560 264 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 ESRP2Q9H6T0 727 aaKnown RBP7.57□□□□□ -1.2
ATG4D-202ENST00000585437 UBTD1Q9HAC8 227 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 MEPEQ9NQ76 525 aaPredicted RBP7.57□□□□□ -1.2
ATG4D-202ENST00000585437 IMPAD1Q9NX62 359 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 SELENONQ9NZV5 590 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 ITGB1BP2Q9UKP3 347 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 SLC7A7Q9UM01 511 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 RNF115Q9Y4L5 304 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 PCDHGB1Q9Y5G3 927 aa7.57□□□□□ -1.2
ATG4D-202ENST00000585437 CHD3Q12873 2000 aaKnown RBP7.57□□□□□ -1.2
ATG4D-202ENST00000585437 SHISA9B4DS77 424 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 FAM20BO75063 409 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 TMCC2O75069 709 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 UPK3AO75631 287 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 SEC14L2O76054 403 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 TSPAN19P0C672 248 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 ASAH2BP0C7U1 165 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 DANCRP0C864 163 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 HLA-DOBP13765 273 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF43P17038 809 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 PTNP21246 168 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 GSTM3P21266 225 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 CBLP22681 906 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 HOXC12P31275 282 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 RBM34P42696 430 aaKnown RBP7.56□□□□□ -1.2
ATG4D-202ENST00000585437 YAP1P46937 504 aaKnown RBP7.56□□□□□ -1.2
ATG4D-202ENST00000585437 TMBIM6P55061 237 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 CLDN17P56750 224 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 SLC35A2P78381 396 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 TGFBR3Q03167 851 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 PUDPQ08623 228 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 ZP4Q12836 540 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 COX10Q12887 443 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 LSAMPQ13449 338 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 STK11Q15831 433 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 NEDD8Q15843 81 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 NIPAL3Q6P499 406 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 PRSS48Q7RTY5 328 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 SLC46A3Q7Z3Q1 461 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 ABHD12BQ7Z5M8 362 aaPredicted RBP7.56□□□□□ -1.2
ATG4D-202ENST00000585437 PXKQ7Z7A4 578 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 TGIF2LYQ8IUE0 185 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 SPARTQ8N0X7 666 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 KBTBD8Q8NFY9 601 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 OR1K1Q8NGR3 316 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 OR5J2Q8NH18 312 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 OR52J3Q8NH60 311 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 FAM81AQ8TBF8 368 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 RAB2BQ8WUD1 216 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 LIPHQ8WWY8 451 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 MYDGFQ969H8 173 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 PIGTQ969N2 578 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 ISOC1Q96CN7 298 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 MUCL1Q96DR8 90 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 ASPNQ9BXN1 380 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 DGCR6LQ9BY27 220 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 PRRG3Q9BZD7 231 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 DUSP21Q9H596 190 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 FKRPQ9H9S5 495 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 NMNAT1Q9HAN9 279 aaPredicted RBP7.56□□□□□ -1.2
ATG4D-202ENST00000585437 KRCC1Q9NPI7 259 aaPredicted RBP7.56□□□□□ -1.2
ATG4D-202ENST00000585437 SLC17A5Q9NRA2 495 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 PLCXD1Q9NUJ7 323 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 UPB1Q9UBR1 384 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF229Q9UJW7 825 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 A4GNTQ9UNA3 340 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 AMDHD2Q9Y303 409 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 NOX1Q9Y5S8 564 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 CR1P17927 2039 aa7.56□□□□□ -1.2
ATG4D-202ENST00000585437 SETD2Q9BYW2 2564 aaPredicted RBP7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ARFGEF3Q5TH69 2177 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ALPK2Q86TB3 2170 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ARPC4-TTLL3A0A0A6YYG9 625 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 CIB4A0PJX0 185 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF587BE7ETH6 402 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 H3BSA7 217 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 J3KTA2 159 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 PLPP3O14495 311 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 RGS10O43665 173 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 AKAP8O43823 692 aaKnown RBP7.55□□□□□ -1.2
ATG4D-202ENST00000585437 OR10H3O60404 316 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 TRMUO75648 421 aaKnown RBP7.55□□□□□ -1.2
ATG4D-202ENST00000585437 CD3EP07766 207 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 OSMP13725 252 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 PTAFRP25105 342 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 POLR2IP36954 125 aaKnown RBP7.55□□□□□ -1.2
ATG4D-202ENST00000585437 TAS2R41P59536 307 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ADAM8P78325 824 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 POU3F1Q03052 451 aaPredicted RBP7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ST3GAL3Q11203 375 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 PMS2P3Q13401 168 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF672Q499Z4 452 aaPredicted RBP7.55□□□□□ -1.2
ATG4D-202ENST00000585437 C9orf135Q5VTT2 229 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF627Q7L945 461 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 NKAIN4Q8IVV8 208 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 WDFY1Q8IWB7 410 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 UEVLDQ8IX04 471 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms