RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SNX33Q8WV41 574 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 LRRC37BQ96QE4 947 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 METTL17Q9H7H0 456 aaPredicted RBP12.84□□□□□ -0.35
VAPA-209ENST00000585042 RNF121Q9H920 327 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 CDH20Q9HBT6 801 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 TAAR3PQ9P1P4 343 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 NDUFAF1Q9Y375 327 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 IQCMA0A1B0GVH7 501 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 FAM157AC9JC47 383 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 M0R3H8 397 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 IGHG1P01857 330 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 MT-ND5P03915 603 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 PATE4P0C8F1 98 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 NAT2P11245 290 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 ZNF84P51523 738 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 ZNF133P52736 654 aaPredicted RBP12.83□□□□□ -0.36
VAPA-209ENST00000585042 NPTX1Q15818 432 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 CYP51A1Q16850 503 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 TBC1D28Q2M2D7 210 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 FAM209AQ5JX71 171 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 INTS11Q5TA45 600 aaKnown RBP12.83□□□□□ -0.36
VAPA-209ENST00000585042 ACSM5Q6NUN0 579 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 SLC16A14Q7RTX9 510 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 C1orf174Q8IYL3 243 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 SEPHS2Q99611 448 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 CGREF1Q99674 301 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 SH3GL3Q99963 347 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 MRPL13Q9BYD1 178 aaKnown RBP12.83□□□□□ -0.36
VAPA-209ENST00000585042 KAT8Q9H7Z6 458 aaKnown RBP12.83□□□□□ -0.36
VAPA-209ENST00000585042 TREM2Q9NZC2 230 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 STX18Q9P2W9 335 aaKnown RBP12.83□□□□□ -0.36
VAPA-209ENST00000585042 SLC7A7Q9UM01 511 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
VAPA-209ENST00000585042 CPSF4LA6NMK7 179 aaKnown RBP12.82□□□□□ -0.36
VAPA-209ENST00000585042 NCR1O76036 304 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 VENTXO95231 258 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 PNPP00491 289 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 IGHV3-13P01766 116 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 THY1P04216 161 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 CD247P20963 164 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 COMPP49747 757 aaPredicted RBP12.82□□□□□ -0.36
VAPA-209ENST00000585042 CLRN1P58418 232 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 MAPRE2Q15555 327 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 SHQ1Q6PI26 577 aaKnown RBP12.82□□□□□ -0.36
VAPA-209ENST00000585042 UNQ6126/PRO20091Q6UXV3 157 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 CCDC80Q76M96 950 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 DHDDSQ86SQ9 333 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 LRRC17Q8N6Y2 441 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 SEMA6DQ8NFY4 1073 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 OR4K5Q8NGD3 323 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 SLC26A7Q8TE54 656 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 MCHR2Q969V1 340 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 POLR2J2Q9GZM3 115 aaKnown RBP12.82□□□□□ -0.36
VAPA-209ENST00000585042 POLR2J3Q9H1A7 115 aaKnown RBP12.82□□□□□ -0.36
VAPA-209ENST00000585042 KCNN2Q9H2S1 579 aa12.82□□□□□ -0.36
VAPA-209ENST00000585042 IGHV1-69-2A0A0G2JMI3 117 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 A0A1W2PRG6 482 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 NPIPB13A6NJU9 1138 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 NPIPB4C9JG80 1138 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 BLOC1S5-TXNDC5H3BN57 136 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 J3QLI3 93 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 WNT9BO14905 357 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 CLPTM1O96005 669 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 LCKP06239 509 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 PCGF2P35227 344 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
VAPA-209ENST00000585042 MAGEB1P43366 347 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 CCL8P80075 99 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 C10orf128Q5T292 105 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 FAHD2BQ6P2I3 314 aaPredicted RBP12.81□□□□□ -0.36
VAPA-209ENST00000585042 NANOGNBQ7Z5D8 188 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.81□□□□□ -0.36
VAPA-209ENST00000585042 RBM15BQ8NDT2 890 aaKnown RBP12.81□□□□□ -0.36
VAPA-209ENST00000585042 FAM216AQ8WUB2 273 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 LIPHQ8WWY8 451 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 FAHD2AQ96GK7 314 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 JMJD8Q96S16 334 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 NSRP1Q9H0G5 558 aaKnown RBP12.81□□□□□ -0.36
VAPA-209ENST00000585042 NARFLQ9H6Q4 476 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 ZNF665Q9H7R5 613 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 SIAEQ9HAT2 523 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 SMURF2Q9HAU4 748 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 G6PC2Q9NQR9 355 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 DECR2Q9NUI1 292 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
VAPA-209ENST00000585042 HTR3EA5X5Y0 456 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 MT-ND1P03886 318 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 OPN1SWP03999 348 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 MMP7P09237 267 aaPredicted RBP12.8□□□□□ -0.36
VAPA-209ENST00000585042 TSPAN19P0C672 248 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 FAM157BP0CG42 384 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 UMPSP11172 480 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 NR2C1P13056 603 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 ACADSP16219 412 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 GATA3P23771 443 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 CFPP27918 469 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 APLNRP35414 380 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 DAP3P51398 398 aaKnown RBP12.8□□□□□ -0.36
VAPA-209ENST00000585042 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms