RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 C16orf89Q6UX73 402 aa17.67■□□□□ 0.42
SS18-224ENST00000584083 ZNF525Q8N782 197 aa17.67■□□□□ 0.42
SS18-224ENST00000584083 FAM86B1Q8N7N1 296 aa17.67■□□□□ 0.42
SS18-224ENST00000584083 CCT8L2Q96SF2 557 aa17.67■□□□□ 0.42
SS18-224ENST00000584083 NDE1Q9NXR1 346 aa17.67■□□□□ 0.42
SS18-224ENST00000584083 NDUFAF4Q9P032 175 aa17.67■□□□□ 0.42
SS18-224ENST00000584083 MAGEL2Q9UJ55 1249 aa17.67■□□□□ 0.42
SS18-224ENST00000584083 ZNF346Q9UL40 294 aaKnown RBP17.67■□□□□ 0.42
SS18-224ENST00000584083 IGHV4-30-2A0A087WSY4 118 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 LY6HO94772 140 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 SLC2A10O95528 541 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 SERPINA5P05154 406 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 NR2C1P13056 603 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 NR4A1P22736 598 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 RPL4P36578 427 aaKnown RBP17.66■□□□□ 0.42
SS18-224ENST00000584083 GALK2Q01415 458 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 SLC36A2Q495M3 483 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 PODNL1Q6PEZ8 512 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 SLC16A14Q7RTX9 510 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 DPPA2Q7Z7J5 298 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 DEFB107AQ8IZN7 70 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 LRRC18Q8N456 261 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 ANKS4BQ8N8V4 417 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 SLC7A13Q8TCU3 470 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 NSMAFQ92636 917 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 C7orf34Q96L11 122 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 TMEM5Q9Y2B1 443 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 FKBP7Q9Y680 259 aa17.66■□□□□ 0.42
SS18-224ENST00000584083 A0A1W2PRQ8 180 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 DIRAS1O95057 198 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 F12P00748 615 aaPredicted RBP17.65■□□□□ 0.42
SS18-224ENST00000584083 IGHMP01871 453 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 ZNF35P13682 527 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 HOXB4P17483 251 aaPredicted RBP17.65■□□□□ 0.42
SS18-224ENST00000584083 MNAT1P51948 309 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 ZNF133P52736 654 aaPredicted RBP17.65■□□□□ 0.42
SS18-224ENST00000584083 VLDLRP98155 873 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 FMODQ06828 376 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 DGCR6Q14129 220 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 NRN1LQ496H8 165 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 C10orf128Q5T292 105 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 GKAP1Q5VSY0 366 aaPredicted RBP17.65■□□□□ 0.42
SS18-224ENST00000584083 FAM205BPQ63HN1 556 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 TMPRSS11FQ6ZWK6 438 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 SVOPLQ8N434 492 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 LRRC75AQ8NAA5 344 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 OR10H5Q8NGA6 315 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 FAM168AQ92567 244 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 POM121Q96HA1 1249 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 PYURFQ96I23 114 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 NSMCE2Q96MF7 247 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 SORCS2Q96PQ0 1159 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 RBP7Q96R05 134 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 KCNK17Q96T54 332 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 ALG12Q9BV10 488 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 KCNN2Q9H2S1 579 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 PLK3Q9H4B4 646 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 SMURF2Q9HAU4 748 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 CD300AQ9UGN4 299 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 CMAHPQ9Y471 501 aa17.65■□□□□ 0.42
SS18-224ENST00000584083 ZFHX3Q15911 3703 aa17.64■□□□□ 0.42
SS18-224ENST00000584083 SH3PXD2BA1X283 911 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 A6NIZ1 184 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 CDC42EP2O14613 210 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 ITGA2P17301 1181 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 CDAP32320 146 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 RAP1BP61224 184 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 RAP1AP62834 184 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 FHL1Q13642 323 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 SGCAQ16586 387 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 ZBED5Q49AG3 693 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 NMD3Q96D46 503 aaKnown RBP17.64■□□□□ 0.41
SS18-224ENST00000584083 FAM46AQ96IP4 442 aaKnown RBP17.64■□□□□ 0.41
SS18-224ENST00000584083 TSPAN32Q96QS1 320 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 NDEL1Q9GZM8 345 aa17.64■□□□□ 0.41
SS18-224ENST00000584083 FBXO9Q9UK97 447 aaPredicted RBP17.64■□□□□ 0.41
SS18-224ENST00000584083 NSD1Q96L73 2696 aaPredicted RBP17.63■□□□□ 0.41
SS18-224ENST00000584083 ARPC2O15144 300 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 MGRN1O60291 552 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 CSF3P09919 207 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 ERVK-25P63136 954 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 MRPS34P82930 218 aaKnown RBP17.63■□□□□ 0.41
SS18-224ENST00000584083 PLP2Q04941 152 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 FXNQ16595 210 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 THEM4Q5T1C6 240 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 SLC25A47Q6Q0C1 308 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 ZNF584Q8IVC4 421 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 FITM2Q8N6M3 262 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 CLDN22Q8N7P3 220 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 SLC30A7Q8NEW0 376 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 OR52J3Q8NH60 311 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 FNDC8Q8TC99 324 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 MCUR1Q96AQ8 359 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 DOK1Q99704 481 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 RAB1BQ9H0U4 201 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 SIAEQ9HAT2 523 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 CDH20Q9HBT6 801 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 DYNLRB1Q9NP97 96 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 CCNB1IP1Q9NPC3 277 aa17.63■□□□□ 0.41
SS18-224ENST00000584083 GRHPRQ9UBQ7 328 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms