RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MED18Q9BUE0 208 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SPATA5L1Q9BVQ7 753 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FKRPQ9H9S5 495 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 BABAM2Q9NXR7 383 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 WDR45Q9Y484 360 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DENND4AQ7Z401 1863 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LEUTXA8MZ59 168 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 IDSB3KWA1 339 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SDC3O75056 442 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 BTCP35070 178 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CRYZQ08257 329 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GPR18Q14330 331 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 EXOSC7Q15024 291 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CD200R1LQ6Q8B3 271 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF836Q6ZNA1 936 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FRRS1Q6ZNA5 592 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZAR1Q86SH2 424 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GPR137CQ8N3F9 429 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZMYND19Q96E35 227 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 BOD1Q96IK1 185 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF48Q96MX3 618 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PTCHD1Q96NR3 888 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KLHL21Q9UJP4 597 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HIF3AQ9Y2N7 669 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PRAMEF26H0Y7S4 382 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 EMC8O43402 210 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FZD7O75084 574 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RGS9O75916 674 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TRAPPC2P0DI81 140 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TRAPPC2BP0DI82 140 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GIMD1P0DJR0 217 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CD1BP29016 333 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLC9A3R2Q15599 337 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NNATQ16517 81 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SFXN4Q6P4A7 337 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CD300LDQ6UXZ3 194 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PGAP1Q75T13 922 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FGD2Q7Z6J4 655 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ACOT11Q8WXI4 607 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HAS2Q92819 552 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OSTF1Q92882 214 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 S100PBPQ96BU1 408 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MEGF10Q96KG7 1140 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PDCD1LG2Q9BQ51 273 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLC25A18Q9H1K4 315 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SEMA6CQ9H3T2 930 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 BCL2L10Q9HD36 194 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KCNE5Q9UJ90 142 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ADAM29Q9UKF5 820 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PPIEQ9UNP9 301 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TMEM82A0PJX8 343 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CDHR4A6H8M9 788 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 C4orf47A7E2U8 309 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SSNA1O43805 119 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RFPL3O75679 317 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PPP1R3DO95685 299 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 JMJD7P0C870 316 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HTR2AP28223 471 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLC6A1P30531 599 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 IFNGR2P38484 337 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PRPS1P60891 318 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PRR5P85299 388 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NHLH1Q02575 133 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DMWDQ09019 674 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CRMP1Q14194 572 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SMIM15Q7Z3B0 74 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CDK20Q8IZL9 346 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF433Q8N7K0 673 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF385AQ96PM9 386 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NT5DC2Q9H857 520 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KLHL28Q9NXS3 571 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLCO1C1Q9NYB5 712 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF780BQ9Y6R6 833 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ARID1AO14497 2285 aa10.56□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CFDP00746 253 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TNFP01375 233 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HPXP02790 462 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 AVPR2P30518 371 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HTR1FP30939 366 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TNK1Q13470 666 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ODF4Q2M2E3 257 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KIAA0895LQ68EN5 471 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SYT13Q7L8C5 426 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TOMM5Q8N4H5 51 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF561Q8N587 486 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MEIOBQ8N635 442 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 C1orf162Q8NEQ5 155 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 THAP4Q8WY91 577 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GHSRQ92847 366 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DVL3Q92997 716 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KLHDC7BQ96G42 594 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ARHGDIGQ99819 225 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 WASF3Q9UPY6 502 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CELSR3Q9NYQ7 3312 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 UNC13CQ8NB66 2214 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 WNT1P04628 370 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LSSP48449 732 aa10.55□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OC90Q02509 493 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms