RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 SLC35D3Q5M8T2 416 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 ZNF57Q68EA5 555 aaPredicted RBP8.9□□□□□ -0.98
MKS1-212ENST00000583577 SLC30A6Q6NXT4 461 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 TMEM91Q6ZNR0 172 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 RTL4Q6ZR62 310 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 WDR53Q7Z5U6 358 aaPredicted RBP8.9□□□□□ -0.98
MKS1-212ENST00000583577 BCDIN3DQ7Z5W3 292 aaKnown RBP8.9□□□□□ -0.98
MKS1-212ENST00000583577 LHFPL3Q86UP9 236 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 COMTD1Q86VU5 262 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 VRK2Q86Y07 508 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 CPOQ8IVL8 374 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 SIRT6Q8N6T7 355 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 NFAM1Q8NET5 270 aaPredicted RBP8.9□□□□□ -0.98
MKS1-212ENST00000583577 OR2T27Q8NH04 317 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 FANK1Q8TC84 345 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 TMEM239Q8WW34 195 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 HOXB13Q92826 284 aaPredicted RBP8.9□□□□□ -0.98
MKS1-212ENST00000583577 UCN3Q969E3 161 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 SLC35A4Q96G79 324 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 WACQ9BTA9 647 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 TMED9Q9BVK6 235 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 DEFB126Q9BYW3 111 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 HDHD2Q9H0R4 259 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 MED28Q9H204 178 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 TMEM27Q9HBJ8 222 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 HINT3Q9NQE9 182 aaKnown RBP8.9□□□□□ -0.98
MKS1-212ENST00000583577 NPDC1Q9NQX5 325 aaPredicted RBP8.9□□□□□ -0.98
MKS1-212ENST00000583577 CNIH4Q9P003 139 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 COPS7AQ9UBW8 275 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 CAMK2AQ9UQM7 478 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 CACNG2Q9Y698 323 aa8.9□□□□□ -0.98
MKS1-212ENST00000583577 NINQ8N4C6 2090 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 PHF3Q92576 2039 aaKnown RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 TRAV17A0A0B4J275 112 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 A0A0B4J293 547 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 TRBV11-1A0A0K0K1C0 115 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 CDHR4A6H8M9 788 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 NKX2-6A6NCS4 301 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 HSPB2A8KAH6 182 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 NOTOA8MTQ0 251 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ZNF879B4DU55 563 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 INAFM1C9JVW0 142 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 OGG1O15527 345 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 CHP2O43745 196 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 REM1O75628 298 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 PPM1BO75688 479 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 SBK2P0C263 348 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ANXA3P12429 323 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 CPMP14384 443 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 IGFBP2P18065 325 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ELK1P19419 428 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 GALNSP34059 522 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 TRHRP34981 398 aaPredicted RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 MNDAP41218 407 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ZNF136P52737 540 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 CD83Q01151 205 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 PMP22Q01453 160 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ZNF267Q14586 743 aaPredicted RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 HSPB2Q16082 182 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ABHD17BQ5VST6 288 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 DMKNQ6E0U4 476 aaPredicted RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 VASNQ6EMK4 673 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 SFXN4Q6P4A7 337 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 C3P1Q6ZMU1 363 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ZNF836Q6ZNA1 936 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 VASH1Q7L8A9 365 aaPredicted RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 KCTD20Q7Z5Y7 419 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 KLBQ86Z14 1044 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 NKAIN4Q8IVV8 208 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 DMRTC2Q8IXT2 367 aaPredicted RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 SLC37A3Q8NCC5 494 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 APCDD1LQ8NCL9 501 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 OR4F15Q8NGB8 312 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ELP5Q8TE02 316 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 PTPMT1Q8WUK0 201 aaPredicted RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 ASB13Q8WXK3 278 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 RIT1Q92963 219 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 UPRTQ96BW1 309 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 C16orf58Q96GQ5 468 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 SAMD8Q96LT4 415 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 GPR137Q96N19 417 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 LMF1Q96S06 567 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 SDF2Q99470 211 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 WFDC6Q9BQY6 131 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 HDHD5Q9BXW7 423 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 TRIM2Q9C040 744 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 OR8D2Q9GZM6 311 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 ABCG5Q9H222 651 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 PLEKHA1Q9HB21 404 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 COQ3Q9NZJ6 369 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 NLKQ9UBE8 527 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 KCNN3Q9UGI6 736 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 SLC7A7Q9UM01 511 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 PPIEQ9UNP9 301 aaKnown RBP8.89□□□□□ -0.99
MKS1-212ENST00000583577 GPR52Q9Y2T5 361 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 CHST2Q9Y4C5 530 aa8.89□□□□□ -0.99
MKS1-212ENST00000583577 LINC00862A6NCI5 91 aa8.88□□□□□ -0.99
MKS1-212ENST00000583577 FAM90A27PA6NNH2 459 aa8.88□□□□□ -0.99
MKS1-212ENST00000583577 LRRN3E7EW58 273 aa8.88□□□□□ -0.99
MKS1-212ENST00000583577 ZNHIT1O43257 154 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms